RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 SNAP25P60880 206 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 AMPD3Q01432 767 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 CSGALNACT2Q8N6G5 542 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 AMNQ9BXJ7 453 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 RIC8AQ9NPQ8 531 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 LRWD1Q9UFC0 647 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 PCDHA1Q9Y5I3 950 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 PITPNM2Q9BZ72 1349 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 ABL1P00519 1130 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 INPP5BP32019 993 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 ARHGAP25P42331 645 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 MRPL12P52815 198 aaKnown RBP16.74■□□□□ 0.27
TPM3-208ENST00000341485 UBE2SQ16763 222 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 RSRC2Q7L4I2 434 aaKnown RBP16.74■□□□□ 0.27
TPM3-208ENST00000341485 KIAA0895Q8NCT3 520 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 CHURC1Q8WUH1 139 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 DCPSQ96C86 337 aaKnown RBP16.74■□□□□ 0.27
TPM3-208ENST00000341485 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 CHP1Q99653 195 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 PRR12Q9ULL5 1215 aa16.74■□□□□ 0.27
TPM3-208ENST00000341485 BICDL2A1A5D9 508 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 B4DLN1 442 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 PES1O00541 588 aaKnown RBP16.73■□□□□ 0.27
TPM3-208ENST00000341485 CLK2P49760 499 aaKnown RBP16.73■□□□□ 0.27
TPM3-208ENST00000341485 MCM6Q14566 821 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 SUPT20HL1Q3ZLR7 823 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 COBLL1Q53SF7 1204 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 ZNF569Q5MCW4 686 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 SV2BQ7L1I2 683 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 FBXO11Q86XK2 927 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 HPS3Q969F9 1004 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 SLF1Q9BQI6 1058 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 TUBGCP2Q9BSJ2 902 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 ZMYND15Q9H091 742 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 EPC1Q9H2F5 836 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 PSTPIP2Q9H939 334 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 MYMKA6NI61 221 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 DNM2P50570 870 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 TMEM266Q2M3C6 531 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 CNNM4Q6P4Q7 775 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 FAM160B2Q86V87 743 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 SCYL3Q8IZE3 742 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 KRT222Q8N1A0 295 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 OR8K1Q8NGG5 319 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 EEF2KMTQ96G04 330 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 CNOT6LQ96LI5 555 aaKnown RBP16.73■□□□□ 0.27
TPM3-208ENST00000341485 DNAJC7Q99615 494 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 GTPBP4Q9BZE4 634 aaKnown RBP16.73■□□□□ 0.27
TPM3-208ENST00000341485 GLT8D2Q9H1C3 349 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 PICK1Q9NRD5 415 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 STK17AQ9UEE5 414 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 CAPN11Q9UMQ6 739 aa16.73■□□□□ 0.27
TPM3-208ENST00000341485 MYH7BA7E2Y1 1941 aa16.72■□□□□ 0.27
TPM3-208ENST00000341485 POTEMA6NI47 508 aa16.72■□□□□ 0.27
TPM3-208ENST00000341485 PPP1R2P41236 205 aa16.72■□□□□ 0.27
TPM3-208ENST00000341485 USH1GQ495M9 461 aa16.72■□□□□ 0.27
TPM3-208ENST00000341485 TEX35Q5T0J7 233 aa16.72■□□□□ 0.27
TPM3-208ENST00000341485 SAMD1Q6SPF0 538 aaPredicted RBP16.72■□□□□ 0.27
TPM3-208ENST00000341485 SLC35F6Q8N357 371 aa16.72■□□□□ 0.27
TPM3-208ENST00000341485 NUDT12Q9BQG2 462 aa16.72■□□□□ 0.27
TPM3-208ENST00000341485 ZNF112Q9UJU3 913 aa16.72■□□□□ 0.27
TPM3-208ENST00000341485 FEM1BQ9UK73 627 aa16.72■□□□□ 0.27
TPM3-208ENST00000341485 LUC7L2Q9Y383 392 aaKnown RBP16.72■□□□□ 0.27
TPM3-208ENST00000341485 REXO2Q9Y3B8 237 aaKnown RBP16.72■□□□□ 0.27
TPM3-208ENST00000341485 RASSF10A6NK89 507 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 PDIA5Q14554 519 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 SULF1Q8IWU6 871 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 LARP4BQ92615 738 aaKnown RBP16.71■□□□□ 0.27
TPM3-208ENST00000341485 SEMA6BQ9H3T3 888 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 AS3MTQ9HBK9 375 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 SLC39A2Q9NP94 309 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 FZD1Q9UP38 647 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 GRIN3BO60391 1043 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 TMEM119Q4V9L6 283 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 MIIPQ5JXC2 388 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 PPP4R3AQ6IN85 833 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 WDR59Q6PJI9 974 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 UNC13DQ70J99 1090 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 FAM114A1Q8IWE2 563 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 LPAR1Q92633 364 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 RAD54LQ92698 747 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
TPM3-208ENST00000341485 CDK5RAP3Q96JB5 506 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 TTYH3Q9C0H2 523 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 KIAA1683Q9H0B3 1180 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 ARGLU1Q9NWB6 273 aaPredicted RBP16.71■□□□□ 0.27
TPM3-208ENST00000341485 FHOD1Q9Y613 1164 aa16.71■□□□□ 0.27
TPM3-208ENST00000341485 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
TPM3-208ENST00000341485 NKRFO15226 690 aaKnown RBP eCLIP16.7■□□□□ 0.26
TPM3-208ENST00000341485 ZRANB2O95218 330 aaKnown RBP eCLIP16.7■□□□□ 0.26
TPM3-208ENST00000341485 NDUFA10O95299 355 aa16.7■□□□□ 0.26
TPM3-208ENST00000341485 KLK7P49862 253 aa16.7■□□□□ 0.26
TPM3-208ENST00000341485 DMTNQ08495 405 aa16.7■□□□□ 0.26
TPM3-208ENST00000341485 TRAF1Q13077 416 aa16.7■□□□□ 0.26
TPM3-208ENST00000341485 BMS1Q14692 1282 aaKnown RBP16.7■□□□□ 0.26
TPM3-208ENST00000341485 GPR161Q8N6U8 529 aaKnown RBP16.7■□□□□ 0.26
TPM3-208ENST00000341485 SNX29Q8TEQ0 813 aa16.7■□□□□ 0.26
TPM3-208ENST00000341485 CDC23Q9UJX2 597 aa16.7■□□□□ 0.26
TPM3-208ENST00000341485 POLR2AP24928 1970 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms