RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 TREML2Q5T2D2 321 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 SPATA1Q5VX52 437 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 NSMFQ6X4W1 530 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 CATSPERGQ6ZRH7 1159 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 CATSPER3Q86XQ3 398 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 SYTL5Q8TDW5 730 aaPredicted RBP29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 INTS13Q9NVM9 706 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 CSADQ9Y600 493 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 TRIM49BA6NDI0 452 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 CHMP2AO43633 222 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 CYP4A11Q02928 519 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 STK4Q13043 487 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 SNRNP48Q6IEG0 339 aaKnown RBP29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 USP50Q70EL3 339 aaPredicted RBP29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 MCF2L2Q86YR7 1114 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 EHMT1Q9H9B1 1298 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 EXOC1Q9NV70 894 aa29.54■■■□□ 2.32
TM6SF1-202ENST00000322019 GLTPD2A6NH11 291 aa29.53■■■□□ 2.32
TM6SF1-202ENST00000322019 PMS1P54277 932 aaKnown RBP29.53■■■□□ 2.32
TM6SF1-202ENST00000322019 PAK1Q13153 545 aa29.53■■■□□ 2.32
TM6SF1-202ENST00000322019 COG2Q14746 738 aa29.53■■■□□ 2.32
TM6SF1-202ENST00000322019 TMEM132BQ14DG7 1078 aa29.53■■■□□ 2.32
TM6SF1-202ENST00000322019 HYIQ5T013 277 aa29.53■■■□□ 2.32
TM6SF1-202ENST00000322019 TAAR1Q96RJ0 339 aa29.53■■■□□ 2.32
TM6SF1-202ENST00000322019 WDR90Q96KV7 1748 aa29.53■■■□□ 2.32
TM6SF1-202ENST00000322019 ITGB5P18084 799 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 EIF2AK2P19525 551 aaKnown RBP29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 TMC6Q7Z403 805 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 ADSSL1Q8N142 457 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 GIMAP8Q8ND71 665 aaPredicted RBP29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 DDX12PQ92771 950 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 RNF146Q9NTX7 359 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 PKD2L1Q9P0L9 805 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 ZNF214Q9UL59 606 aaPredicted RBP29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 PYCARDQ9ULZ3 195 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 KDM3AQ9Y4C1 1321 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 SPATA31C1P0DKV0 1188 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 PSMC6P62333 389 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 TTLL12Q14166 644 aaPredicted RBP29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 TEX2Q8IWB9 1127 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 OTUD5Q96G74 571 aa29.52■■■□□ 2.32
TM6SF1-202ENST00000322019 PAPPA2Q9BXP8 1791 aa29.51■■■□□ 2.32
TM6SF1-202ENST00000322019 ZNF500O60304 480 aaPredicted RBP29.51■■■□□ 2.31
TM6SF1-202ENST00000322019 CT47A1Q5JQC4 288 aaPredicted RBP29.51■■■□□ 2.31
TM6SF1-202ENST00000322019 LRCH2Q5VUJ6 765 aa29.51■■■□□ 2.31
TM6SF1-202ENST00000322019 CACTINQ8WUQ7 758 aaKnown RBP29.51■■■□□ 2.31
TM6SF1-202ENST00000322019 RWDD2AQ9UIY3 292 aa29.51■■■□□ 2.31
TM6SF1-202ENST00000322019 RPTORQ8N122 1335 aa29.51■■■□□ 2.31
TM6SF1-202ENST00000322019 IDEP14735 1019 aa29.51■■■□□ 2.31
TM6SF1-202ENST00000322019 NT5C3AQ9H0P0 336 aa29.51■■■□□ 2.31
TM6SF1-202ENST00000322019 RGL1Q9NZL6 768 aa29.51■■■□□ 2.31
TM6SF1-202ENST00000322019 NPHP3-ACAD11A0A0J9YXS1 232 aa29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 SPDYE16A6NNV3 312 aaPredicted RBP29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 IRF6O14896 467 aa29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 IREB2P48200 963 aaKnown RBP29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 RAD51AP2Q09MP3 1159 aa29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 PLS1Q14651 629 aa29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 RNF207Q6ZRF8 634 aa29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 WDR11Q9BZH6 1224 aa29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 TAF1DQ9H5J8 278 aaPredicted RBP29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 SLC39A2Q9NP94 309 aa29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 ADAMTS5Q9UNA0 930 aa29.5■■■□□ 2.31
TM6SF1-202ENST00000322019 PSMD10O75832 226 aa29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 PLA2G4BP0C869 781 aa29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 POTEJP0CG39 1038 aa29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 CACNB1Q02641 598 aaPredicted RBP29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 HAUS3Q68CZ6 603 aa29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 OTOP1Q7RTM1 612 aa29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 KIAA0895Q8NCT3 520 aa29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 ZNF577Q9BSK1 485 aa29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 GHRHRQ02643 423 aa29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 TPD52L1Q16890 204 aaPredicted RBP29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 SLC5A5Q92911 643 aa29.49■■■□□ 2.31
TM6SF1-202ENST00000322019 MRPS9P82933 396 aaKnown RBP29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 BAATQ14032 418 aaPredicted RBP29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 SH3D19Q5HYK7 790 aa29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 CDKAL1Q5VV42 579 aa29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 ERMNQ8TAM6 284 aa29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 EEF2KMTQ96G04 330 aa29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 EIF2AK1Q9BQI3 630 aaKnown RBP29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 MXRA8Q9BRK3 442 aa29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 DDX39AO00148 427 aaKnown RBP29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 GAS7O60861 476 aa29.48■■■□□ 2.31
TM6SF1-202ENST00000322019 RPA1P27694 616 aa29.47■■■□□ 2.31
TM6SF1-202ENST00000322019 UNC13DQ70J99 1090 aa29.47■■■□□ 2.31
TM6SF1-202ENST00000322019 GLIS3Q8NEA6 775 aa29.47■■■□□ 2.31
TM6SF1-202ENST00000322019 RBM46Q8TBY0 533 aaKnown RBP29.47■■■□□ 2.31
TM6SF1-202ENST00000322019 DNAJC19Q96DA6 116 aa29.47■■■□□ 2.31
TM6SF1-202ENST00000322019 PTPRFP10586 1907 aa29.47■■■□□ 2.31
TM6SF1-202ENST00000322019 TPM3P06753 285 aa29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 FDX1P10109 184 aa29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 PABPC4Q13310 644 aaKnown RBP eCLIP29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 CTTNQ14247 550 aaKnown RBP29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 GADL1Q6ZQY3 521 aa29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 APTXQ7Z2E3 356 aaKnown RBP29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 ZC3H15Q8WU90 426 aaKnown RBP29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 CCDC47Q96A33 483 aaKnown RBP29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 RMDN3Q96TC7 470 aa29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 IPO5O00410 1097 aaKnown RBP29.46■■■□□ 2.31
TM6SF1-202ENST00000322019 MYCLP12524 364 aaPredicted RBP29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms