RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 KRT28Q7Z3Y7 464 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 TAX1BP1Q86VP1 789 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 CCDC197Q8NCU1 140 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 ARMC2Q8NEN0 867 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 CCT6BQ92526 530 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 PRCCQ92733 491 aaPredicted RBP12.06□□□□□ -0.48
SNX20-201ENST00000300590 TATDN2Q93075 761 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 LRRC45Q96CN5 670 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 PLCB1Q9NQ66 1216 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 PANK4Q9NVE7 773 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 IRS4O14654 1257 aaPredicted RBP12.06□□□□□ -0.48
SNX20-201ENST00000300590 SART1O43290 800 aaKnown RBP12.06□□□□□ -0.48
SNX20-201ENST00000300590 KIF4AO95239 1232 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 TROAPQ12815 778 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 XRCC4Q13426 336 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 TMTC3Q6ZXV5 915 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 PLCD4Q9BRC7 762 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 ISCA1Q9BUE6 129 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 F8W031 263 aaPredicted RBP12.05□□□□□ -0.48
SNX20-201ENST00000300590 DYNLL1P63167 89 aaKnown RBP12.05□□□□□ -0.48
SNX20-201ENST00000300590 RPS6KA1Q15418 735 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 ADGRA1Q86SQ6 560 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 CABP7Q86V35 215 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 BLIDQ8IZY5 108 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 THEMISQ8N1K5 641 aaPredicted RBP12.05□□□□□ -0.48
SNX20-201ENST00000300590 KIF2BQ8N4N8 673 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 USP38Q8NB14 1042 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 KCNV2Q8TDN2 545 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 TBC1D22AQ8WUA7 517 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 SIK3Q9Y2K2 1263 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 MYH6P13533 1939 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 NFAT5O94916 1531 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 ARHGAP23Q9P227 1491 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 CCT8L1PA6NM43 557 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 MGRN1O60291 552 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 ITGA4P13612 1032 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 SLC9C1Q4G0N8 1177 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 KIF6Q6ZMV9 814 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 MREGQ8N565 214 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 AGAP11Q8TF27 550 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 UIMC1Q96RL1 719 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 TRIM9Q9C026 710 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 ECM29Q5VYK3 1845 aa12.05□□□□□ -0.48
SNX20-201ENST00000300590 A0A087X0T9 212 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 FAM228BP0C875 321 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 DRD4P21917 467 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 TECP42680 631 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 CDK17Q00537 523 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 PRPF4BQ13523 1007 aaKnown RBP12.04□□□□□ -0.48
SNX20-201ENST00000300590 LETM2Q2VYF4 491 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 ANKS4BQ8N8V4 417 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 ZBTB38Q8NAP3 1195 aaPredicted RBP12.04□□□□□ -0.48
SNX20-201ENST00000300590 PARD3BQ8TEW8 1205 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 CHMP6Q96FZ7 201 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 TCP11L1Q9NUJ3 509 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 SPATS2LQ9NUQ6 558 aaKnown RBP12.04□□□□□ -0.48
SNX20-201ENST00000300590 IRAK4Q9NWZ3 460 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 GGA2Q9UJY4 613 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 A0A1W2PQJ5 194 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 KRIT1O00522 736 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 CSF1RP07333 972 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 SLCO1A2P46721 670 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 KCNJ2P63252 427 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 ZKSCAN8Q15776 578 aaPredicted RBP12.04□□□□□ -0.48
SNX20-201ENST00000300590 NBPF9Q3BBW0 867 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 FAM133AQ8N9E0 248 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 GLIS3Q8NEA6 775 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 ZNF483Q8TF39 744 aaPredicted RBP12.04□□□□□ -0.48
SNX20-201ENST00000300590 INPP4AQ96PE3 977 aaPredicted RBP12.04□□□□□ -0.48
SNX20-201ENST00000300590 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 ISCUQ9H1K1 167 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 KBTBD4Q9NVX7 518 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 TBC1D7Q9P0N9 293 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 H0YGN5 161 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 TTI1O43156 1089 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 CAND2O75155 1236 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 MMEP08473 750 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 CHN1P15882 459 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 COPB2P35606 906 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 SFMBT2Q5VUG0 894 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 TRIM68Q6AZZ1 485 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 CAPRIN2Q6IMN6 1127 aaKnown RBP12.04□□□□□ -0.48
SNX20-201ENST00000300590 PDXDC1Q6P996 788 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 BZW1Q7L1Q6 419 aaKnown RBP12.04□□□□□ -0.48
SNX20-201ENST00000300590 HEATR3Q7Z4Q2 680 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 CCDC84Q86UT8 332 aaPredicted RBP12.04□□□□□ -0.48
SNX20-201ENST00000300590 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 C4orf32Q8N8J7 132 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 KIAA0895Q8NCT3 520 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 NFS1Q9Y697 457 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 BCL9LQ86UU0 1499 aa12.04□□□□□ -0.48
SNX20-201ENST00000300590 A8MUI8 341 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 AP1G2O75843 785 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 PUM3Q15397 648 aaKnown RBP12.03□□□□□ -0.48
SNX20-201ENST00000300590 MGARPQ8TDB4 240 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 BAP1Q92560 729 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 XPO6Q96QU8 1125 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms