RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MOB2Q70IA6 237 aa17.43■□□□□ 0.38
LSM6-201ENST00000296581 LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
LSM6-201ENST00000296581 RAD54LQ92698 747 aa17.43■□□□□ 0.38
LSM6-201ENST00000296581 MRFAP1L1Q96HT8 127 aa17.43■□□□□ 0.38
LSM6-201ENST00000296581 CLMNQ96JQ2 1002 aa17.43■□□□□ 0.38
LSM6-201ENST00000296581 RNF146Q9NTX7 359 aa17.43■□□□□ 0.38
LSM6-201ENST00000296581 RIPK3Q9Y572 518 aa17.43■□□□□ 0.38
LSM6-201ENST00000296581 STK24Q9Y6E0 443 aa17.43■□□□□ 0.38
LSM6-201ENST00000296581 A0A0G2JLL6 359 aaPredicted RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 CXCL11O14625 94 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 CD44P16070 742 aaKnown RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 CDC25BP30305 580 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 CCT6AP40227 531 aaKnown RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 RPS6P62753 249 aaKnown RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 UBXN2AP68543 259 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 SETQ01105 290 aaPredicted RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 TMEM132BQ14DG7 1078 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 SV2BQ7L1I2 683 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 PRRT2Q7Z6L0 340 aaPredicted RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 SLC5A5Q92911 643 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 UIMC1Q96RL1 719 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 MED15Q96RN5 788 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 MAF1Q9H063 256 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 IRF6O14896 467 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 ZNF500O60304 480 aaPredicted RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 RHOBTB3O94955 611 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 STAT3P40763 770 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 TKFCQ3LXA3 575 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 TREML2Q5T2D2 321 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 PAXIP1Q6ZW49 1069 aaPredicted RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 KCNK18Q7Z418 384 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 PROCA1Q8NCQ7 364 aaPredicted RBP17.42■□□□□ 0.38
LSM6-201ENST00000296581 TEX13BQ9BXU2 312 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 KCNH4Q9UQ05 1017 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
LSM6-201ENST00000296581 HOXA7P31268 230 aaPredicted RBP17.41■□□□□ 0.38
LSM6-201ENST00000296581 TTLL12Q14166 644 aaPredicted RBP17.41■□□□□ 0.38
LSM6-201ENST00000296581 MCM6Q14566 821 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 KMT5BQ4FZB7 885 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 HAUS3Q68CZ6 603 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 CNNM4Q6P4Q7 775 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 SLC30A10Q6XR72 485 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 RNF207Q6ZRF8 634 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 NIPA1Q7RTP0 329 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 ARMC9Q7Z3E5 817 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 OTUD5Q96G74 571 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 MXRA8Q9BRK3 442 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 BCRP11274 1271 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 PPIL2Q13356 520 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 PCNX4Q63HM2 1172 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 SMYD4Q8IYR2 804 aaPredicted RBP17.41■□□□□ 0.38
LSM6-201ENST00000296581 ERMNQ8TAM6 284 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 LRRC27Q9C0I9 530 aa17.41■□□□□ 0.38
LSM6-201ENST00000296581 PSMD10O75832 226 aa17.4■□□□□ 0.38
LSM6-201ENST00000296581 PTMAP06454 111 aaKnown RBP17.4■□□□□ 0.38
LSM6-201ENST00000296581 LDLRAD1Q5T700 205 aa17.4■□□□□ 0.38
LSM6-201ENST00000296581 TAAR1Q96RJ0 339 aa17.4■□□□□ 0.38
LSM6-201ENST00000296581 FANCLQ9NW38 375 aa17.4■□□□□ 0.38
LSM6-201ENST00000296581 MED24O75448 989 aa17.4■□□□□ 0.38
LSM6-201ENST00000296581 ITGB5P18084 799 aa17.4■□□□□ 0.38
LSM6-201ENST00000296581 NCAPH2Q6IBW4 605 aa17.4■□□□□ 0.38
LSM6-201ENST00000296581 IL31RAQ8NI17 732 aa17.4■□□□□ 0.38
LSM6-201ENST00000296581 ZNF830Q96NB3 372 aaPredicted RBP17.4■□□□□ 0.38
LSM6-201ENST00000296581 UBIAD1Q9Y5Z9 338 aa17.4■□□□□ 0.38
LSM6-201ENST00000296581 MYMKA6NI61 221 aa17.39■□□□□ 0.37
LSM6-201ENST00000296581 RPA1P27694 616 aa17.39■□□□□ 0.37
LSM6-201ENST00000296581 PPP2R5CQ13362 524 aa17.39■□□□□ 0.37
LSM6-201ENST00000296581 NSMFQ6X4W1 530 aa17.39■□□□□ 0.37
LSM6-201ENST00000296581 OTOP1Q7RTM1 612 aa17.39■□□□□ 0.37
LSM6-201ENST00000296581 TRMT44Q8IYL2 757 aaKnown RBP17.39■□□□□ 0.37
LSM6-201ENST00000296581 GIMAP8Q8ND71 665 aaPredicted RBP17.39■□□□□ 0.37
LSM6-201ENST00000296581 KIAA1024Q9UPX6 916 aa17.39■□□□□ 0.37
LSM6-201ENST00000296581 NFE2L3Q9Y4A8 694 aa17.39■□□□□ 0.37
LSM6-201ENST00000296581 POTEB3A0JP26 581 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 SPATA31C1P0DKV0 1188 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 ARP10275 920 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 ZNF18P17022 549 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 ASIC1P78348 528 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 LRCH2Q5VUJ6 765 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 POTEBQ6S5H4 581 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 LBX2Q6XYB7 198 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 CATSPER3Q86XQ3 398 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 CCDC47Q96A33 483 aaKnown RBP17.38■□□□□ 0.37
LSM6-201ENST00000296581 POLR3CQ9BUI4 534 aaPredicted RBP17.38■□□□□ 0.37
LSM6-201ENST00000296581 GDAQ9Y2T3 454 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 SYNRGQ9UMZ2 1314 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 PVALEFA0A1B0GWK0 134 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 UNCXA6NJT0 531 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 POTEIP0CG38 1075 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 POTEJP0CG39 1038 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 ATP1A3P13637 1013 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 MRPS9P82933 396 aaKnown RBP17.38■□□□□ 0.37
LSM6-201ENST00000296581 BAATQ14032 418 aaPredicted RBP17.38■□□□□ 0.37
LSM6-201ENST00000296581 DHX8Q14562 1220 aaKnown RBP17.38■□□□□ 0.37
LSM6-201ENST00000296581 PGM5Q15124 567 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 SPATA1Q5VX52 437 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 POTEEQ6S8J3 1075 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 B3GNT9Q6UX72 402 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 GADL1Q6ZQY3 521 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms