RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TEX33O43247 280 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 PTPRAP18433 802 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 RPA1P27694 616 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 ZNF76P36508 570 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 EPS15P42566 896 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 COPB1P53618 953 aaKnown RBP11.37□□□□□ -0.59
C9orf43-201ENST00000288462 TERF1P54274 439 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 BACE1P56817 501 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 KCNJ12Q14500 433 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 FILIP1LQ4L180 1135 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 NOL9Q5SY16 702 aaKnown RBP11.37□□□□□ -0.59
C9orf43-201ENST00000288462 ERMNQ8TAM6 284 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 SLC5A5Q92911 643 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 UIMC1Q96RL1 719 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 DUSP9Q99956 384 aaKnown RBP11.37□□□□□ -0.59
C9orf43-201ENST00000288462 TANGO6Q9C0B7 1094 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 FHDC1Q9C0D6 1143 aaPredicted RBP11.37□□□□□ -0.59
C9orf43-201ENST00000288462 PNMA2Q9UL42 364 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 KIAA1024Q9UPX6 916 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 RABGAP1Q9Y3P9 1069 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 PLA2G4BP0C869 781 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 SPATA31C1P0DKV0 1188 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 FDX1P10109 184 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 EEF1GP26641 437 aaKnown RBP11.36□□□□□ -0.59
C9orf43-201ENST00000288462 SETQ01105 290 aaPredicted RBP11.36□□□□□ -0.59
C9orf43-201ENST00000288462 PSMD2Q13200 908 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 NCAPH2Q6IBW4 605 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 FOXR2Q6PJQ5 311 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
C9orf43-201ENST00000288462 DYMQ7RTS9 669 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 SAMD3Q8N6K7 520 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 ZNF280CQ8ND82 737 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 ANKRD20A12PQ8NF67 263 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 ZKSCAN4Q969J2 545 aaPredicted RBP11.36□□□□□ -0.59
C9orf43-201ENST00000288462 KLRG1Q96E93 195 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 RPAP3Q9H6T3 665 aaPredicted RBP11.36□□□□□ -0.59
C9orf43-201ENST00000288462 PICK1Q9NRD5 415 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 A0A0G2JMZ2 1700 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 POTEFA5A3E0 1075 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 E9PMD0 336 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 NFIBO00712 420 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 NRDCO43847 1150 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 PSMD10O75832 226 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 FLOT1O75955 427 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 SLC12A3P55017 1021 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 COASYQ13057 564 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 SPP2Q13103 211 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 CEP55Q53EZ4 464 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 POTEGQ6S5H5 508 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 POTEEQ6S8J3 1075 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 CATSPER3Q86XQ3 398 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 TMEM139Q8IV31 216 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 GUF1Q8N442 669 aaKnown RBP11.36□□□□□ -0.59
C9orf43-201ENST00000288462 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 TC2NQ8N9U0 490 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 HPS3Q969F9 1004 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 POLR3CQ9BUI4 534 aaPredicted RBP11.36□□□□□ -0.59
C9orf43-201ENST00000288462 MAP3K20Q9NYL2 800 aaKnown RBP11.36□□□□□ -0.59
C9orf43-201ENST00000288462 COL20A1Q9P218 1284 aa11.36□□□□□ -0.59
C9orf43-201ENST00000288462 FRMD3A2A2Y4 597 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 CYP11B2P19099 503 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 PPP2R5CQ13362 524 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 PRAMEF18Q5VWM3 479 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 CENPPQ6IPU0 288 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 MCF2L2Q86YR7 1114 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 CCAR2Q8N163 923 aaKnown RBP11.35□□□□□ -0.59
C9orf43-201ENST00000288462 SLC39A2Q9NP94 309 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 TAB2Q9NYJ8 693 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 USP27XA6NNY8 438 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 MEIS1O00470 390 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 N4BP3O15049 544 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 LRCH2Q5VUJ6 765 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 E4F1Q66K89 784 aaPredicted RBP11.35□□□□□ -0.59
C9orf43-201ENST00000288462 ANKRD40Q6AI12 368 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 NIPA1Q7RTP0 329 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 GPBP1Q86WP2 473 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 CSGALNACT2Q8N6G5 542 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.35□□□□□ -0.59
C9orf43-201ENST00000288462 SRRTQ9BXP5 876 aaKnown RBP11.35□□□□□ -0.59
C9orf43-201ENST00000288462 SEMA6BQ9H3T3 888 aa11.35□□□□□ -0.59
C9orf43-201ENST00000288462 RAVER2Q9HCJ3 691 aaKnown RBP11.35□□□□□ -0.59
C9orf43-201ENST00000288462 R3HCC1Q9Y3T6 440 aaKnown RBP11.35□□□□□ -0.59
C9orf43-201ENST00000288462 LGALS16A8MUM7 142 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 C19orf81C9J6K1 198 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 EML1O00423 815 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 VWA5AO00534 786 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 ZBED4O75132 1171 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 BCRP11274 1271 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 ALAS1P13196 640 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 IDEP14735 1019 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 UBXN2AP68543 259 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 GOLGA8FQ08AF8 430 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 GOLGA8DPQ0D2H9 430 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 SUPT20HL1Q3ZLR7 823 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 MUM1L1Q5H9M0 696 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 DNTTIP2Q5QJE6 756 aaKnown RBP11.34□□□□□ -0.59
C9orf43-201ENST00000288462 B3GNT9Q6UX72 402 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 NYAP1Q6ZVC0 841 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms