RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 DDX41Q9UJV9 622 aaKnown RBP10.58□□□□□ -0.72
HMGN1-201ENST00000288344 ZHX1Q9UKY1 873 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-201ENST00000288344 TPCN1Q9ULQ1 816 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 GOLGA8AA7E2F4 631 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 GOLGA8BA8MQT2 603 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 H0YGN5 161 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 GCOM1H8Y6P7 765 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-201ENST00000288344 DHX16O60231 1041 aaKnown RBP10.57□□□□□ -0.72
HMGN1-201ENST00000288344 CTDNEP1O95476 244 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 NUDT7P0C024 238 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 POLR2MP0CAP2 368 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 HOXD8P13378 290 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-201ENST00000288344 ICAM3P32942 547 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.72
HMGN1-201ENST00000288344 ACLYP53396 1101 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 ST3GAL1Q11201 340 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 NPY5RQ15761 445 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 PRPF38BQ5VTL8 546 aaKnown RBP10.57□□□□□ -0.72
HMGN1-201ENST00000288344 SYNE3Q6ZMZ3 975 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 PIBF1Q8WXW3 757 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 EMID1Q96A84 441 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-201ENST00000288344 INPP4AQ96PE3 977 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-201ENST00000288344 WDR11Q9BZH6 1224 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 SENP6Q9GZR1 1112 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-201ENST00000288344 BCAS3Q9H6U6 928 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 CDHR5Q9HBB8 845 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 NCOA5Q9HCD5 579 aaKnown RBP10.57□□□□□ -0.72
HMGN1-201ENST00000288344 PDRG1Q9NUG6 133 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
HMGN1-201ENST00000288344 SCN10AQ9Y5Y9 1956 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 CCDC196A0A1B0GTZ2 297 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 A0A1W2PQ45 241 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-201ENST00000288344 A0A1W2PQY0 241 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 ESYT2A0FGR8 921 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 MOXD2PA6NHM9 499 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 M0R2N6 131 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 DYNC1LI2O43237 492 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-201ENST00000288344 PFKFB2O60825 505 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 ASGR1P07306 291 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 EIF2AK2P19525 551 aaKnown RBP10.56□□□□□ -0.72
HMGN1-201ENST00000288344 AK2P54819 239 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 ARHGAP1Q07960 439 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 STXBP2Q15833 593 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 AMHR2Q16671 573 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 ANKRD33Q7Z3H0 272 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 RNF180Q86T96 592 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 SCFD2Q8WU76 684 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 COPS5Q92905 334 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 GPKOWQ92917 476 aaPredicted RBP eCLIP10.56□□□□□ -0.722e-6■■■■□ 20.4
HMGN1-201ENST00000288344 HTATIP2Q9BUP3 242 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 RNF26Q9BY78 433 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-201ENST00000288344 ZMYND12Q9H0C1 365 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 PSTPIP2Q9H939 334 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 RIC8AQ9NPQ8 531 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 ELP1O95163 1332 aa10.56□□□□□ -0.72
HMGN1-201ENST00000288344 MYH7BA7E2Y1 1941 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 SPATA31C2B4DYI2 1134 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 hCG_1984214I3L0E3 225 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 NKRFO15226 690 aaKnown RBP eCLIP10.55□□□□□ -0.72
HMGN1-201ENST00000288344 LARGE1O95461 756 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 TGFB3P10600 412 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 FDPSP14324 419 aaKnown RBP10.55□□□□□ -0.72
HMGN1-201ENST00000288344 ITGB5P18084 799 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
HMGN1-201ENST00000288344 BEX3Q00994 111 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 SCRN1Q12765 414 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 PCNX4Q63HM2 1172 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 ZNF713Q8N859 430 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-201ENST00000288344 PHKBQ93100 1093 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 TOX2Q96NM4 488 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 GDF15Q99988 308 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
HMGN1-201ENST00000288344 TRIOBPQ9H2D6 2365 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 EIF5BO60841 1220 aaKnown RBP10.54□□□□□ -0.72
HMGN1-201ENST00000288344 CD4P01730 458 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 TXNP10599 105 aaKnown RBP10.54□□□□□ -0.72
HMGN1-201ENST00000288344 SCG2P13521 617 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 ITGB8P26012 769 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 PURAQ00577 322 aaKnown RBP10.54□□□□□ -0.72
HMGN1-201ENST00000288344 FSCN1Q16658 493 aaKnown RBP10.54□□□□□ -0.72
HMGN1-201ENST00000288344 ME3Q16798 604 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 LY6KQ17RY6 165 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 GNASQ5JWF2 1037 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 VARS2Q5ST30 1063 aaKnown RBP10.54□□□□□ -0.72
HMGN1-201ENST00000288344 ARHGEF16Q5VV41 709 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 PPP1R18Q6NYC8 613 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 XRRA1Q6P2D8 792 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 FCHSD1Q86WN1 690 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 PCSK9Q8NBP7 692 aaKnown RBP10.54□□□□□ -0.72
HMGN1-201ENST00000288344 KAT2BQ92831 832 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 FERMT2Q96AC1 680 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 SEC63Q9UGP8 760 aaKnown RBP10.54□□□□□ -0.72
HMGN1-201ENST00000288344 TELO2Q9Y4R8 837 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 UBIAD1Q9Y5Z9 338 aa10.54□□□□□ -0.72
HMGN1-201ENST00000288344 TRIM43BA6NCK2 446 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 B4DLN1 442 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 ATP9AO75110 1047 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 STAM2O75886 525 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms