RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TRIM66O15016 1216 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 CAMTA2O94983 1202 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 IFNAR2P48551 515 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 GBP7Q8N8V2 638 aaPredicted RBP13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 FAM133AQ8N9E0 248 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 RPGRIP1Q96KN7 1286 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 KRT12Q99456 494 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 TMEM60Q9H2L4 133 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 DPH5Q9H2P9 285 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 LGALS16A8MUM7 142 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 PFDN1O60925 122 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 TFRCP02786 760 aaKnown RBP13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 SLFN13Q68D06 897 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 CEP128Q6ZU80 1094 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 IL17RAQ96F46 866 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 ADAMTS1Q9UHI8 967 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 NR2F2P24468 414 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 KIF11P52732 1056 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 HIBCHQ6NVY1 386 aaPredicted RBP13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 THRAP3Q9Y2W1 955 aaKnown RBP13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 CCDC169A6NNP5 214 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 NOL3O60936 208 aaKnown RBP13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 ATP2B4P23634 1241 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 HSPA1LP34931 641 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 PDE6BP35913 854 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 DPYDQ12882 1025 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 NT5C3AQ9H0P0 336 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 FAM217BQ9NTX9 383 aaPredicted RBP13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 AGPAT5Q9NUQ2 364 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 MYO1AQ9UBC5 1043 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 SERPINB13Q9UIV8 391 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 SALL1Q9NSC2 1324 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 SFI1A8K8P3 1242 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 GOLGA8KD6RF30 607 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 RGS16O15492 202 aaPredicted RBP13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 TDP2O95551 362 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 SERPINB2P05120 415 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 HARSP12081 509 aaKnown RBP13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 VSNL1P62760 191 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 TADA2BQ86TJ2 420 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 ARHGEF35A5YM69 484 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 GYPCP04921 128 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 MAN2A1Q16706 1144 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 CERKLQ49MI3 558 aaPredicted RBP13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 TRIM4Q9C037 500 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 CTTNBP2NLQ9P2B4 639 aa13.73□□□□□ -0.21
SLC6A1-201ENST00000287766 NCK2O43639 380 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 ATP1A1P05023 1023 aaKnown RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 ZNF365Q70YC5 407 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 SDCCAG8Q86SQ7 713 aaPredicted RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 PEAK1Q9H792 1746 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 ZNF185O15231 689 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 SPOPO43791 374 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 CALUO43852 315 aaPredicted RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 TCP1P17987 556 aaKnown RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 KLK7P49862 253 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 COG7P83436 770 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 TROAPQ12815 778 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 AK8Q96MA6 479 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 THAP9Q9H5L6 903 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 EPB41L5Q9HCM4 733 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 SORBS3O60504 671 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 POLE2P56282 527 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 FKBP3Q00688 224 aaKnown RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 ICA1Q05084 483 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 ANKRD20A3Q5VUR7 823 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 CEP120Q8N960 986 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 ASIC3Q9UHC3 531 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 PCDHA13Q9Y5I0 950 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 FLOT1O75955 427 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 NTSR2O95665 410 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 HOXA13P31271 388 aaPredicted RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 VWA3BQ502W6 1294 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 ANKRD40Q6AI12 368 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 TAOK1Q7L7X3 1001 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 RPUSD2Q8IZ73 545 aaKnown RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 MARCH10Q8NA82 808 aaPredicted RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 CCDC97Q96F63 343 aaPredicted RBP13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 CFAP57Q96MR6 1250 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 NBPF3Q9H094 633 aa13.72□□□□□ -0.21
SLC6A1-201ENST00000287766 STX2P32856 288 aa13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 GSDMBQ8TAX9 411 aa13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 CCDC110Q8TBZ0 833 aa13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 TCHPQ9BT92 498 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms