RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 VPS52Q8N1B4 723 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 TTC16Q8NEE8 873 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 NUCKS1Q9H1E3 243 aaKnown RBP17.16■□□□□ 0.34
USP43-201ENST00000285199 EPB41L4AQ9HCS5 686 aaPredicted RBP17.16■□□□□ 0.34
USP43-201ENST00000285199 BIRC3Q13489 604 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 ZNF804AQ7Z570 1209 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 DDX12PQ92771 950 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 RNPC3Q96LT9 517 aaKnown RBP17.16■□□□□ 0.34
USP43-201ENST00000285199 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 GMNCA6NCL1 334 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 SMIM5Q71RC9 77 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 PPFIBP2Q8ND30 876 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 FBXL5Q9UKA1 691 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 CAPN11Q9UMQ6 739 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 CAPN6Q9Y6Q1 641 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 CALUO43852 315 aaPredicted RBP17.15■□□□□ 0.34
USP43-201ENST00000285199 PRPF6O94906 941 aaKnown RBP17.15■□□□□ 0.34
USP43-201ENST00000285199 MMEP08473 750 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 LSP1P33241 339 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 FAM83BQ5T0W9 1011 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 PPM1KQ8N3J5 372 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 SYNCQ9H7C4 482 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 PSTPIP2Q9H939 334 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 PSD3Q9NYI0 1048 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 HEG1Q9ULI3 1381 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 GNPATO15228 680 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 THAP12O43422 761 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
USP43-201ENST00000285199 WDR91A4D1P6 747 aa17.14■□□□□ 0.34
USP43-201ENST00000285199 CCDC13Q8IYE1 715 aa17.14■□□□□ 0.34
USP43-201ENST00000285199 RNF10Q8N5U6 811 aaKnown RBP17.14■□□□□ 0.34
USP43-201ENST00000285199 KIFC2Q96AC6 838 aa17.14■□□□□ 0.34
USP43-201ENST00000285199 ATG3Q9NT62 314 aa17.14■□□□□ 0.34
USP43-201ENST00000285199 CCDC87Q9NVE4 849 aa17.14■□□□□ 0.34
USP43-201ENST00000285199 ABCC12Q96J65 1359 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 ATP2A1O14983 1001 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 MUM1Q2TAK8 710 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 HVCN1Q96D96 273 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 ANO9A1A5B4 782 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 TXNDC9O14530 226 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 EARS2Q5JPH6 523 aaKnown RBP17.14■□□□□ 0.33
USP43-201ENST00000285199 HAUS3Q68CZ6 603 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 KCTD1Q719H9 257 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 HNRNPLLQ8WVV9 542 aaKnown RBP17.14■□□□□ 0.33
USP43-201ENST00000285199 SMC6Q96SB8 1091 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 YIPF3Q9GZM5 350 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 INTUQ9ULD6 942 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 HMGB1P1B2RPK0 211 aaPredicted RBP17.14■□□□□ 0.33
USP43-201ENST00000285199 DPP8Q6V1X1 898 aaPredicted RBP17.14■□□□□ 0.33
USP43-201ENST00000285199 ZNF473Q8WTR7 871 aaKnown RBP17.14■□□□□ 0.33
USP43-201ENST00000285199 PIGBQ92521 554 aa17.14■□□□□ 0.33
USP43-201ENST00000285199 NPHP4O75161 1426 aaPredicted RBP17.13■□□□□ 0.33
USP43-201ENST00000285199 KAZNQ674X7 775 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 MDM1Q8TC05 714 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 WHAMMQ8TF30 809 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 IL17RAQ96F46 866 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 TMEM60Q9H2L4 133 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 INO80Q9ULG1 1556 aaPredicted RBP17.13■□□□□ 0.33
USP43-201ENST00000285199 ATP6V1G3Q96LB4 118 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 ZC3H12CQ9C0D7 883 aaKnown RBP17.13■□□□□ 0.33
USP43-201ENST00000285199 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 A2ML1A8K2U0 1454 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 COPB2P35606 906 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 SNAP25P60880 206 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 ATP2C1P98194 919 aaPredicted RBP17.13■□□□□ 0.33
USP43-201ENST00000285199 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 HP1BP3Q5SSJ5 553 aaPredicted RBP17.13■□□□□ 0.33
USP43-201ENST00000285199 APBB1IPQ7Z5R6 666 aaPredicted RBP17.13■□□□□ 0.33
USP43-201ENST00000285199 PCIF1Q9H4Z3 704 aa17.13■□□□□ 0.33
USP43-201ENST00000285199 ADGRB1O14514 1584 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 REREQ9P2R6 1566 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 BAG2O95816 211 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 MECOMQ03112 1051 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 THRAP3Q9Y2W1 955 aaKnown RBP17.12■□□□□ 0.33
USP43-201ENST00000285199 E9PMD0 336 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 SMIM22K7EJ46 135 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 SERPING1P05155 500 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 GBP1P32455 592 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 SCNN1DP51172 638 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 ADSSL1Q8N142 457 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 PLCB1Q9NQ66 1216 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 PALLDQ8WX93 1383 aa17.12■□□□□ 0.33
USP43-201ENST00000285199 A0A087X0B3 334 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 ARHGEF35A5YM69 484 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 SUN1O94901 812 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 MFSD14BQ5SR56 506 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 NSMFQ6X4W1 530 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 GCNT4Q9P109 453 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 HDAC9Q9UKV0 1011 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 ARHGAP31Q2M1Z3 1444 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 SMIM24O75264 130 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 PDHA1P08559 390 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 MSANTD4Q8NCY6 345 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 STK36Q9NRP7 1315 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 NEK9Q8TD19 979 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms