RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PAPD7Q5XG87 772 aaKnown RBP14.39□□□□□ -0.11
C9orf3-201ENST00000277198 CDC42EP5Q6NZY7 148 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 HHIPL2Q6UWX4 724 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 CABP7Q86V35 215 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 ZSCAN29Q8IWY8 852 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-201ENST00000277198 CSGALNACT2Q8N6G5 542 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 RASGRP4Q8TDF6 673 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 CLMNQ96JQ2 1002 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 TUBGCP2Q9BSJ2 902 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 TRIM9Q9C026 710 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 MAPK8IP1Q9UQF2 711 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 REXO2Q9Y3B8 237 aaKnown RBP14.39□□□□□ -0.11
C9orf3-201ENST00000277198 FLT1P17948 1338 aa14.39□□□□□ -0.11
C9orf3-201ENST00000277198 TRIM49BA6NDI0 452 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 KLRF2D3W0D1 207 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 POLR3GO15318 223 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-201ENST00000277198 IPO7O95373 1038 aaKnown RBP14.38□□□□□ -0.11
C9orf3-201ENST00000277198 PLCG2P16885 1265 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 NF2P35240 595 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 PMS1P54277 932 aaKnown RBP14.38□□□□□ -0.11
C9orf3-201ENST00000277198 SLC35G1Q2M3R5 365 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 CNNM4Q6P4Q7 775 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 WDR59Q6PJI9 974 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 FOXR2Q6PJQ5 311 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 NEDD1Q8NHV4 660 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 SH3RF3Q8TEJ3 882 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-201ENST00000277198 ERGIC2Q96RQ1 377 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 MRIQ9BWK5 157 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 ACBD3Q9H3P7 528 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 ZSWIM4Q9H7M6 989 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 ABCB11O95342 1321 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 ANO9A1A5B4 782 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 EIF3CLB5ME19 914 aaKnown RBP14.38□□□□□ -0.11
C9orf3-201ENST00000277198 COBLO75128 1261 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 RASA1P20936 1047 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 NOVP48745 357 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 FKBP1BP68106 108 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 TCP10Q12799 353 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 C16orf86Q6ZW13 317 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 NEK8Q86SG6 692 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 ZFPM1Q8IX07 1006 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 DYNLL2Q96FJ2 89 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 PNKPQ96T60 521 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 EIF3CQ99613 913 aaKnown RBP14.38□□□□□ -0.11
C9orf3-201ENST00000277198 DUSP9Q99956 384 aaKnown RBP14.38□□□□□ -0.11
C9orf3-201ENST00000277198 STX8Q9UNK0 236 aa14.38□□□□□ -0.11
C9orf3-201ENST00000277198 TARSL2A2RTX5 802 aaKnown RBP14.37□□□□□ -0.11
C9orf3-201ENST00000277198 USP2O75604 605 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-201ENST00000277198 SLURP2P0DP57 97 aa14.37□□□□□ -0.11
C9orf3-201ENST00000277198 PLCG1P19174 1290 aa14.37□□□□□ -0.11
C9orf3-201ENST00000277198 CKAP4Q07065 602 aaKnown RBP14.37□□□□□ -0.11
C9orf3-201ENST00000277198 TBC1D8BQ0IIM8 1120 aa14.37□□□□□ -0.11
C9orf3-201ENST00000277198 NOGQ13253 232 aa14.37□□□□□ -0.11
C9orf3-201ENST00000277198 MUM1L1Q5H9M0 696 aa14.37□□□□□ -0.11
C9orf3-201ENST00000277198 RRP36Q96EU6 259 aaKnown RBP14.37□□□□□ -0.11
C9orf3-201ENST00000277198 TSGA10Q9BZW7 698 aa14.37□□□□□ -0.11
C9orf3-201ENST00000277198 VIPAS39Q9H9C1 493 aa14.37□□□□□ -0.11
C9orf3-201ENST00000277198 PPP2R3BQ9Y5P8 575 aa14.37□□□□□ -0.11
C9orf3-201ENST00000277198 SAR1BQ9Y6B6 198 aa14.37□□□□□ -0.11
C9orf3-201ENST00000277198 PP2D1A8MPX8 630 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 ABL1P00519 1130 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 TRIM21P19474 475 aaKnown RBP14.36□□□□□ -0.11
C9orf3-201ENST00000277198 HNRNPH3P31942 346 aaKnown RBP14.36□□□□□ -0.11
C9orf3-201ENST00000277198 MAP2K2P36507 400 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 LBX1P52954 281 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 NAPAP54920 295 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 MAP2K1Q02750 393 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-201ENST00000277198 PDE4DQ08499 809 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 TNFAIP1Q13829 316 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 CCDC122Q5T0U0 273 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 LDLRAD1Q5T700 205 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 TGFBRAP1Q8WUH2 860 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 CALML4Q96GE6 196 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 ABCB6Q9NP58 842 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 USP40Q9NVE5 1235 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 STK17AQ9UEE5 414 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 FAM198AQ9UFP1 575 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 SEC63Q9UGP8 760 aaKnown RBP14.36□□□□□ -0.11
C9orf3-201ENST00000277198 GUCA1BQ9UMX6 200 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 GAKO14976 1311 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 GPR75-ASB3A0A0A6YYF3 556 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 PVALEFA0A1B0GWK0 134 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 SMCO2A6NFE2 343 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 FGFR1OPO95684 399 aaKnown RBP14.36□□□□□ -0.11
C9orf3-201ENST00000277198 HSPA8P11142 646 aaKnown RBP14.36□□□□□ -0.11
C9orf3-201ENST00000277198 HERVK_113P62684 666 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 MAP9Q49MG5 647 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 FKBP15Q5T1M5 1219 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 ARMC9Q7Z3E5 817 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 SLF2Q8IX21 1173 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 CCDC102AQ96A19 550 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-201ENST00000277198 LRRC27Q9C0I9 530 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 MED4Q9NPJ6 270 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 ADAM21Q9UKJ8 722 aa14.36□□□□□ -0.11
C9orf3-201ENST00000277198 ERICH4A6NGS2 130 aa14.35□□□□□ -0.11
C9orf3-201ENST00000277198 B4DLN1 442 aa14.35□□□□□ -0.11
C9orf3-201ENST00000277198 CCNT1O60563 726 aaKnown RBP14.35□□□□□ -0.11
C9orf3-201ENST00000277198 BTDP43251 543 aa14.35□□□□□ -0.11
C9orf3-201ENST00000277198 VSNL1P62760 191 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms