RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 IL31RAQ8NI17 732 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 CDK5RAP3Q96JB5 506 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 C7orf25Q9BPX7 421 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 ACAD9Q9H845 621 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 UBIAD1Q9Y5Z9 338 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 STK24Q9Y6E0 443 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 KLRC4O43908 158 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 PSMD10O75832 226 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 RPN1P04843 607 aaKnown RBP16.31■□□□□ 0.2
TRIM23-202ENST00000274327 FKBP1BP68106 108 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 SEMA3FQ13275 785 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
TRIM23-202ENST00000274327 KCNB1Q14721 858 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 SARM1Q6SZW1 724 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 NSMFQ6X4W1 530 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
TRIM23-202ENST00000274327 RAD54LQ92698 747 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 NT5C3AQ9H0P0 336 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 PXMP2Q9NR77 195 aa16.31■□□□□ 0.2
TRIM23-202ENST00000274327 SOCS7O14512 581 aa16.3■□□□□ 0.2
TRIM23-202ENST00000274327 ITGB5P18084 799 aa16.3■□□□□ 0.2
TRIM23-202ENST00000274327 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
TRIM23-202ENST00000274327 MRPS9P82933 396 aaKnown RBP16.3■□□□□ 0.2
TRIM23-202ENST00000274327 PGM5Q15124 567 aa16.3■□□□□ 0.2
TRIM23-202ENST00000274327 GPAT2Q6NUI2 795 aa16.3■□□□□ 0.2
TRIM23-202ENST00000274327 KCNK18Q7Z418 384 aa16.3■□□□□ 0.2
TRIM23-202ENST00000274327 CHST13Q8NET6 341 aa16.3■□□□□ 0.2
TRIM23-202ENST00000274327 LARP4BQ92615 738 aaKnown RBP16.3■□□□□ 0.2
TRIM23-202ENST00000274327 RMND1Q9NWS8 449 aa16.3■□□□□ 0.2
TRIM23-202ENST00000274327 BTBD7Q9P203 1132 aa16.3■□□□□ 0.2
TRIM23-202ENST00000274327 MED24O75448 989 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 ARP10275 920 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 IRX3P78415 501 aaPredicted RBP16.29■□□□□ 0.2
TRIM23-202ENST00000274327 AMPD3Q01432 767 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 PPP2R5CQ13362 524 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 NCAPH2Q6IBW4 605 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 SV2BQ7L1I2 683 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 OTOP1Q7RTM1 612 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 SLC10A4Q96EP9 437 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 TRIM9Q9C026 710 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 ASCC2Q9H1I8 757 aaPredicted RBP16.29■□□□□ 0.2
TRIM23-202ENST00000274327 ZNF408Q9H9D4 720 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 CNMDO75829 334 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 EIF2AK2P19525 551 aaKnown RBP16.29■□□□□ 0.2
TRIM23-202ENST00000274327 ERCC5P28715 1186 aaPredicted RBP16.29■□□□□ 0.2
TRIM23-202ENST00000274327 MYL5Q02045 173 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 MCM6Q14566 821 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 PLS1Q14651 629 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 LRCH2Q5VUJ6 765 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 XRRA1Q6P2D8 792 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 CNNM4Q6P4Q7 775 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 B3GNT9Q6UX72 402 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.29■□□□□ 0.2
TRIM23-202ENST00000274327 ERMNQ8TAM6 284 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 ZFP91Q96JP5 570 aaPredicted RBP16.29■□□□□ 0.2
TRIM23-202ENST00000274327 HSD3B7Q9H2F3 369 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 A1CFQ9NQ94 594 aaKnown RBP16.29■□□□□ 0.2
TRIM23-202ENST00000274327 JADE2Q9NQC1 790 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 CYP39A1Q9NYL5 469 aa16.29■□□□□ 0.2
TRIM23-202ENST00000274327 PPP1R3GB7ZBB8 358 aa16.28■□□□□ 0.2
TRIM23-202ENST00000274327 RHOBTB3O94955 611 aa16.28■□□□□ 0.2
TRIM23-202ENST00000274327 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
TRIM23-202ENST00000274327 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
TRIM23-202ENST00000274327 RPA1P27694 616 aa16.28■□□□□ 0.2
TRIM23-202ENST00000274327 HERVK_113P62684 666 aa16.28■□□□□ 0.2
TRIM23-202ENST00000274327 PLCB2Q00722 1185 aa16.28■□□□□ 0.2
TRIM23-202ENST00000274327 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRIM23-202ENST00000274327 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
TRIM23-202ENST00000274327 KMT5BQ4FZB7 885 aa16.28■□□□□ 0.2
TRIM23-202ENST00000274327 ZNF658Q5TYW1 1059 aaPredicted RBP16.28■□□□□ 0.2
TRIM23-202ENST00000274327 ENOX1Q8TC92 643 aaKnown RBP16.28■□□□□ 0.2
TRIM23-202ENST00000274327 PURBQ96QR8 312 aaKnown RBP16.28■□□□□ 0.2
TRIM23-202ENST00000274327 ZNF577Q9BSK1 485 aa16.28■□□□□ 0.2
TRIM23-202ENST00000274327 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
TRIM23-202ENST00000274327 GBA2Q9HCG7 927 aaPredicted RBP16.28■□□□□ 0.2
TRIM23-202ENST00000274327 POTEB3A0JP26 581 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 EML1O00423 815 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 SPATA31C1P0DKV0 1188 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 OSBPP22059 807 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 ARHGEF16Q5VV41 709 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 POTEBQ6S5H4 581 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 CATSPER3Q86XQ3 398 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 MED15Q96RN5 788 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 RIT2Q99578 217 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 LRRC27Q9C0I9 530 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 SPATC1LQ9H0A9 340 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 KIAA1024Q9UPX6 916 aa16.27■□□□□ 0.2
TRIM23-202ENST00000274327 TRPM7Q96QT4 1865 aa16.27■□□□□ 0.19
TRIM23-202ENST00000274327 MYMKA6NI61 221 aa16.26■□□□□ 0.19
TRIM23-202ENST00000274327 GAS7O60861 476 aa16.26■□□□□ 0.19
TRIM23-202ENST00000274327 ZNF75DP51815 510 aa16.26■□□□□ 0.19
TRIM23-202ENST00000274327 TPM4P67936 248 aa16.26■□□□□ 0.19
TRIM23-202ENST00000274327 KCTD17Q8N5Z5 321 aa16.26■□□□□ 0.19
TRIM23-202ENST00000274327 TEKT3Q9BXF9 490 aa16.26■□□□□ 0.19
TRIM23-202ENST00000274327 WDR11Q9BZH6 1224 aa16.26■□□□□ 0.19
TRIM23-202ENST00000274327 AGO4Q9HCK5 861 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms