RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 AMACRQ9UHK6 382 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 A6NNZ2 444 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 NMT2O60551 498 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 BCAMP50895 628 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 TUBB8Q3ZCM7 444 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 CCDC197Q8NCU1 140 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 STRBPQ96SI9 672 aaKnown RBP14.09□□□□□ -0.15
HERC6-202ENST00000273960 ISCA1Q9BUE6 129 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 ABCF3Q9NUQ8 709 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 RMND1Q9NWS8 449 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 TNKSO95271 1327 aa14.08□□□□□ -0.15
HERC6-202ENST00000273960 SHBGP04278 402 aa14.08□□□□□ -0.16
HERC6-202ENST00000273960 RBM5P52756 815 aaKnown RBP eCLIP14.08□□□□□ -0.16
HERC6-202ENST00000273960 UAP1Q16222 522 aaPredicted RBP14.08□□□□□ -0.16
HERC6-202ENST00000273960 ARHGEF10LQ9HCE6 1279 aa14.08□□□□□ -0.16
HERC6-202ENST00000273960 CCDC87Q9NVE4 849 aa14.08□□□□□ -0.16
HERC6-202ENST00000273960 KLRC1P26715 233 aa14.08□□□□□ -0.16
HERC6-202ENST00000273960 SGMS1Q86VZ5 419 aa14.08□□□□□ -0.16
HERC6-202ENST00000273960 ERICH1Q86X53 443 aa14.08□□□□□ -0.16
HERC6-202ENST00000273960 LCORLQ8N3X6 602 aa14.08□□□□□ -0.16
HERC6-202ENST00000273960 ZNF570Q96NI8 536 aa14.08□□□□□ -0.16
HERC6-202ENST00000273960 ADAMTS1Q9UHI8 967 aa14.08□□□□□ -0.16
HERC6-202ENST00000273960 KIAA0753Q2KHM9 967 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 GLE1Q53GS7 698 aaKnown RBP14.07□□□□□ -0.16
HERC6-202ENST00000273960 FAM47EQ6ZV65 393 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 C15orf41Q9Y2V0 281 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 PDS5AQ29RF7 1337 aaKnown RBP14.07□□□□□ -0.16
HERC6-202ENST00000273960 PDE8AO60658 829 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 ITGA4P13612 1032 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 RAPGEF1Q13905 1077 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 MEA1Q16626 185 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 PPP4R3AQ6IN85 833 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 OTUD6AQ7L8S5 288 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 DYDC1Q8WWB3 177 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 TBC1D5Q92609 795 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 DUSP9Q99956 384 aaKnown RBP14.07□□□□□ -0.16
HERC6-202ENST00000273960 AGAP1Q9UPQ3 857 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 CCT8L1PA6NM43 557 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 MMEP08473 750 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 ELOA2Q8IYF1 753 aaPredicted RBP14.07□□□□□ -0.16
HERC6-202ENST00000273960 LRRC34Q8IZ02 419 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 TAF1DQ9H5J8 278 aaPredicted RBP14.07□□□□□ -0.16
HERC6-202ENST00000273960 TBC1D7Q9P0N9 293 aa14.07□□□□□ -0.16
HERC6-202ENST00000273960 MARF1Q9Y4F3 1742 aaKnown RBP14.06□□□□□ -0.16
HERC6-202ENST00000273960 H0Y3Z8 333 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 SMIM24O75264 130 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 EEF1GP26641 437 aaKnown RBP14.06□□□□□ -0.16
HERC6-202ENST00000273960 EVX2Q03828 476 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 RNASELQ05823 741 aaKnown RBP14.06□□□□□ -0.16
HERC6-202ENST00000273960 PLCB4Q15147 1175 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 SOGA3Q5TF21 947 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 GDF3Q9NR23 364 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 WTIPA6NIX2 430 aaPredicted RBP14.06□□□□□ -0.16
HERC6-202ENST00000273960 FOXO6A8MYZ6 492 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 F8W031 263 aaPredicted RBP14.06□□□□□ -0.16
HERC6-202ENST00000273960 SLC5A1P13866 664 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 CHN1P15882 459 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 LIFRP42702 1097 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 ANKS4BQ8N8V4 417 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 CCT6BQ92526 530 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 SH3GL3Q99963 347 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 TRIM51Q9BSJ1 452 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 GRIK3Q13003 919 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 PKN1Q16512 942 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
HERC6-202ENST00000273960 IFIT1BQ5T764 474 aaKnown RBP14.06□□□□□ -0.16
HERC6-202ENST00000273960 PRMT1Q99873 361 aaKnown RBP14.06□□□□□ -0.16
HERC6-202ENST00000273960 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.06□□□□□ -0.16
HERC6-202ENST00000273960 A0A1W2PQC6 194 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 IGF2BP3O00425 579 aaKnown RBP eCLIP14.05□□□□□ -0.16
HERC6-202ENST00000273960 UBOX5O94941 541 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 GYG1P46976 350 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 NKX1-1Q15270 411 aaPredicted RBP14.05□□□□□ -0.16
HERC6-202ENST00000273960 TAF11Q15544 211 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 TTI2Q6NXR4 508 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 PTF1AQ7RTS3 328 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 TATDN2Q93075 761 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 CHMP6Q96FZ7 201 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 TTI1O43156 1089 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 MGRN1O60291 552 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 ALDH5A1P51649 535 aaPredicted RBP14.05□□□□□ -0.16
HERC6-202ENST00000273960 POLR2FP61218 127 aaKnown RBP14.05□□□□□ -0.16
HERC6-202ENST00000273960 TNNC1P63316 161 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 RBBP5Q15291 538 aaKnown RBP14.05□□□□□ -0.16
HERC6-202ENST00000273960 P2RX5Q93086 422 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 PURBQ96QR8 312 aaKnown RBP14.05□□□□□ -0.16
HERC6-202ENST00000273960 KRT23Q9C075 422 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 TMEM60Q9H2L4 133 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 SAMD15Q9P1V8 674 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 SLC12A6Q9UHW9 1150 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 PDE8BO95263 885 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 DRD4P21917 467 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 SESN3P58005 492 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 XRCC4Q13426 336 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 INF2Q27J81 1249 aa14.05□□□□□ -0.16
HERC6-202ENST00000273960 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
HERC6-202ENST00000273960 STK36Q9NRP7 1315 aa14.04□□□□□ -0.16
HERC6-202ENST00000273960 DCCP43146 1447 aa14.04□□□□□ -0.16
HERC6-202ENST00000273960 GNPATO15228 680 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms