RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 GNGT2O14610 69 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 PYGBP11216 843 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 TCIRG1Q13488 830 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 FBXO11Q86XK2 927 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 TEX12Q9BXU0 123 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SCHIP1Q9P0W5 487 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SYNGAP1Q96PV0 1343 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 PRDM15P57071 1507 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 CEBPAP49715 358 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 FOXD4Q12950 439 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 NNTQ13423 1086 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 MMS19Q96T76 1030 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 FMO2Q99518 471 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 STAP2Q9UGK3 403 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 TNKSO95271 1327 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 KRT1P04264 644 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 NFKBIAP25963 317 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 DR1Q01658 176 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 PTGDRQ13258 359 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 TAF11Q15544 211 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 LRRC23Q53EV4 343 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 KRT80Q6KB66 452 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 IFNL3Q8IZI9 196 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 ZMYND12Q9H0C1 365 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 TMEM206Q9H813 350 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 NOP53Q9NZM5 478 aaKnown RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 GINS2Q9Y248 185 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SH3GLB2Q9NR46 395 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 NR2F2P24468 414 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SCYL2Q6P3W7 929 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 TRAIPQ9BWF2 469 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 HNRNPDLO14979 420 aaKnown RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 CCDC138Q96M89 665 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SLC39A2Q9NP94 309 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 NDE1Q9NXR1 346 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SPAG7O75391 227 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 IFRD2Q12894 506 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 ZBTB41Q5SVQ8 909 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 ODR4Q5SWX8 454 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SLC35F6Q8N357 371 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SLC12A6Q9UHW9 1150 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 MCF2P10911 925 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 TAC1P20366 129 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 MYO1EQ12965 1108 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 UBE3CQ15386 1083 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 DNAJC24Q6P3W2 148 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 PDXDC1Q6P996 788 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 MMS22LQ6ZRQ5 1243 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 RAPH1Q70E73 1250 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 LSG1Q9H089 658 aaKnown RBP8.61□□□□□ -1.03
LIMD1-201ENST00000273317 GPR108Q9NPR9 543 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 USP40Q9NVE5 1235 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 PPARGP37231 505 aaPredicted RBP8.61□□□□□ -1.03
LIMD1-201ENST00000273317 CASP2P42575 452 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 ZBED6P86452 979 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 DYNC1I2Q13409 638 aaKnown RBP8.61□□□□□ -1.03
LIMD1-201ENST00000273317 TMC4Q7Z404 712 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 SKA2Q8WVK7 121 aaPredicted RBP8.61□□□□□ -1.03
LIMD1-201ENST00000273317 BPIFA3Q9BQP9 254 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 SNX25Q9H3E2 840 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 NVLO15381 856 aaKnown RBP8.61□□□□□ -1.03
LIMD1-201ENST00000273317 MX2P20592 715 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 BZW1Q7L1Q6 419 aaKnown RBP8.61□□□□□ -1.03
LIMD1-201ENST00000273317 PTPN22Q9Y2R2 807 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 CREB3O43889 395 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 RFX1P22670 979 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 ICA1Q05084 483 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 DLGAP5Q15398 846 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 KCTD6Q8NC69 237 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 ZBTB18Q99592 522 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 DISC1Q9NRI5 854 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 KCNA4P22459 653 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 FSCBQ5H9T9 825 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 CDHR1Q96JP9 859 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 LRRC37BQ96QE4 947 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 WDR11Q9BZH6 1224 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 SLC38A10Q9HBR0 1119 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 TRIM33Q9UPN9 1127 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 KLRF2D3W0D1 207 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 MAN1A2O60476 641 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 PLS3P13797 630 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 FAM173BQ6P4H8 233 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 CENPUQ71F23 418 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 EPB41L5Q9HCM4 733 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 ANLNQ9NQW6 1124 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 DONSONQ9NYP3 566 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 TAF1BQ53T94 588 aaPredicted RBP8.61□□□□□ -1.03
LIMD1-201ENST00000273317 MIS18BP1Q6P0N0 1132 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 PLA2G4DQ86XP0 818 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 PRPF38AQ8NAV1 312 aaKnown RBP8.61□□□□□ -1.03
LIMD1-201ENST00000273317 hCG_2014768A0A024R1R8 64 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 TLK1Q9UKI8 766 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 ATP8A1Q9Y2Q0 1164 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 CSADQ9Y600 493 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 SPDYE16A6NNV3 312 aaPredicted RBP8.61□□□□□ -1.03
LIMD1-201ENST00000273317 ATP6V1E1P36543 226 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 SCRN1Q12765 414 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 NUMA1Q14980 2115 aa8.61□□□□□ -1.03
LIMD1-201ENST00000273317 SPDYE2Q495Y8 402 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms