RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 SLFNL1Q499Z3 407 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 GPIHBP1Q8IV16 184 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 UTP15Q8TED0 518 aaKnown RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 AFAP1L1Q8TED9 768 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 PBXIP1Q96AQ6 731 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 TEX13BQ9BXU2 312 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 DNAJC25Q9H1X3 360 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 NDFIP2Q9NV92 336 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 RRN3Q9NYV6 651 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 NSD3Q9BZ95 1437 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 HSMCR30P0CW71 290 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 GNALP38405 381 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 CSTF3Q12996 717 aaKnown RBP9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 MOGSQ13724 837 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 NFE2L1Q14494 772 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 PCSK7Q16549 785 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 NUGGCQ68CJ6 796 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 CEP85Q6P2H3 762 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 RASSF3Q86WH2 238 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 SGCDQ92629 289 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 CCDC42Q96M95 316 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 SNX6Q9UNH7 406 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 PLEKHH1Q9ULM0 1364 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 ASXL1Q8IXJ9 1541 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 NUTM2FA1L443 756 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 CCDC160A6NGH7 325 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 ZEB2O60315 1214 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 TSC22D2O75157 780 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 GNAI1P63096 354 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 FAM133AQ8N9E0 248 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 SYT2Q8N9I0 419 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 LILRB1Q8NHL6 650 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 LRGUKQ96M69 825 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 PRAM1Q96QH2 718 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 FAM167BQ9BTA0 163 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 ZWILCHQ9H900 591 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 GDPD2Q9HCC8 539 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 EIF2B4Q9UI10 523 aaKnown RBP9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 CYTH4Q9UIA0 394 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 TMCO1Q9UM00 188 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 PIK3R4Q99570 1358 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 NPC1L1Q9UHC9 1359 aa9.67□□□□□ -0.86
CTDSPL-201ENST00000273179 NOTOA8MTQ0 251 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 KRT5P13647 590 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 HOXC13P31276 330 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 PHBP35232 272 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 OXCT1P55809 520 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 WDR44Q5JSH3 913 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 PTF1AQ7RTS3 328 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 GOT1L1Q8NHS2 421 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 HIC2Q96JB3 615 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 CCDC28BQ9BUN5 200 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 PLVAPQ9BX97 442 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 OSBPL1AQ9BXW6 950 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 CEP44Q9C0F1 390 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 TTLL3Q9Y4R7 772 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ABCC3O15438 1527 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 CCDC171Q6TFL3 1326 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 CCDC151A5D8V7 595 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 FLOT2Q14254 428 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ZNF554Q86TJ5 538 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 MAELQ96JY0 434 aaKnown RBP9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 GGNBP2Q9H3C7 697 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 HNRNPCL2B2RXH8 293 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 SULT1B1O43704 296 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 HNRNPCL1O60812 293 aaKnown RBP9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 RASGRP1O95267 797 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 MTHFD1P11586 935 aaKnown RBP9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 IGHMBP2P38935 993 aaKnown RBP9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 P3H1Q32P28 736 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ANKDD1AQ495B1 522 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 SMYD5Q6GMV2 418 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 FAM173BQ6P4H8 233 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ELMSAN1Q6PJG2 1045 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 CRTC1Q6UUV9 634 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 CCBE1Q6UXH8 406 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ARHGEF18Q6ZSZ5 1173 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 OMA1Q96E52 524 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 VPS50Q96JG6 964 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ATP13A3Q9H7F0 1226 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 HOMER2Q9NSB8 354 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 MALT1Q9UDY8 824 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 MAP3K4Q9Y6R4 1608 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ZNF254O75437 659 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 MYBL1P10243 752 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 PRKAR2AP13861 404 aaKnown RBP9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ETV3P41162 512 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 NAA30Q147X3 362 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 CREB3L3Q68CJ9 461 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 DEPTORQ8TB45 409 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ATP6V1G3Q96LB4 118 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 RIOK1Q9BRS2 568 aaKnown RBP9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 ARHGEF38Q9NXL2 777 aa9.66□□□□□ -0.86
CTDSPL-201ENST00000273179 SIGLEC1Q9BZZ2 1709 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 B4DLN1 442 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 INO80B-WBP1J3KQ70 363 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 ZBED4O75132 1171 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms