RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CYLC1P35663 651 aaPredicted RBP17.98■□□□□ 0.47
UBE3D-201ENST00000237186 COASYQ13057 564 aa17.98■□□□□ 0.47
UBE3D-201ENST00000237186 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
UBE3D-201ENST00000237186 RBM26Q5T8P6 1007 aaKnown RBP17.98■□□□□ 0.47
UBE3D-201ENST00000237186 TMCO3Q6UWJ1 677 aa17.98■□□□□ 0.47
UBE3D-201ENST00000237186 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
UBE3D-201ENST00000237186 ETNPPLQ8TBG4 499 aa17.98■□□□□ 0.47
UBE3D-201ENST00000237186 P2RX7Q99572 595 aaKnown RBP17.98■□□□□ 0.47
UBE3D-201ENST00000237186 TSG101Q99816 390 aa17.98■□□□□ 0.47
UBE3D-201ENST00000237186 HERC5Q9UII4 1024 aaKnown RBP17.98■□□□□ 0.47
UBE3D-201ENST00000237186 PLAGL2Q9UPG8 496 aa17.98■□□□□ 0.47
UBE3D-201ENST00000237186 PCDHA2Q9Y5H9 948 aa17.98■□□□□ 0.47
UBE3D-201ENST00000237186 STK24Q9Y6E0 443 aa17.98■□□□□ 0.47
UBE3D-201ENST00000237186 PSMD14O00487 310 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 PLA2G4BP0C869 781 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 ZSCAN20P17040 1043 aaPredicted RBP17.97■□□□□ 0.47
UBE3D-201ENST00000237186 SREBF1P36956 1147 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 KLK7P49862 253 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 HERVK_113P62684 666 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 ARHGAP4P98171 946 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 SPIRE1Q08AE8 756 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 FAM26FQ5R3K3 315 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 ARHGAP27Q6ZUM4 889 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 GJA10Q969M2 543 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 PANK4Q9NVE7 773 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 KIAA1024Q9UPX6 916 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 PITPNM2Q9BZ72 1349 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 SCN9AQ15858 1988 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 ZNF646O15015 1829 aaPredicted RBP17.97■□□□□ 0.47
UBE3D-201ENST00000237186 FRMD3A2A2Y4 597 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 GDF11O95390 407 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 CHMP4BP1P59074 171 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 JAG1P78504 1218 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 FKBP3Q00688 224 aaKnown RBP17.97■□□□□ 0.47
UBE3D-201ENST00000237186 AMPD2Q01433 879 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 WHAMMP3Q1A5X7 153 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 CCDC65Q8IXS2 484 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 EDEM3Q9BZQ6 932 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 NHEJ1Q9H9Q4 299 aaPredicted RBP17.97■□□□□ 0.47
UBE3D-201ENST00000237186 FHOD1Q9Y613 1164 aa17.97■□□□□ 0.47
UBE3D-201ENST00000237186 MYH4Q9Y623 1939 aa17.96■□□□□ 0.47
UBE3D-201ENST00000237186 YDJCA8MPS7 323 aa17.96■□□□□ 0.47
UBE3D-201ENST00000237186 PIK3CDO00329 1044 aa17.96■□□□□ 0.47
UBE3D-201ENST00000237186 GH2P01242 217 aa17.96■□□□□ 0.47
UBE3D-201ENST00000237186 HAUS3Q68CZ6 603 aa17.96■□□□□ 0.47
UBE3D-201ENST00000237186 KCTD17Q8N5Z5 321 aa17.96■□□□□ 0.47
UBE3D-201ENST00000237186 LENG9Q96B70 501 aa17.96■□□□□ 0.47
UBE3D-201ENST00000237186 FAM20AQ96MK3 541 aa17.96■□□□□ 0.47
UBE3D-201ENST00000237186 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
UBE3D-201ENST00000237186 SLX4Q8IY92 1834 aa17.96■□□□□ 0.47
UBE3D-201ENST00000237186 E9PMD0 336 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 RAD21O60216 631 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 KIF20AO95235 890 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 CYP3A4P08684 503 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 CYP11B2P19099 503 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 SLC12A3P55017 1021 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 MARSP56192 900 aaKnown RBP17.95■□□□□ 0.46
UBE3D-201ENST00000237186 TRAF1Q13077 416 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 RRP1BQ14684 758 aaKnown RBP17.95■□□□□ 0.46
UBE3D-201ENST00000237186 TEX35Q5T0J7 233 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 ZC3H3Q8IXZ2 948 aaKnown RBP17.95■□□□□ 0.46
UBE3D-201ENST00000237186 EHBP1Q8NDI1 1231 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 CEP63Q96MT8 703 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 SPDYE3A6NKU9 549 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 GNA14O95837 355 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 LRRC41Q15345 812 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 GLIS3Q8NEA6 775 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 PCMTD1Q96MG8 357 aaPredicted RBP17.95■□□□□ 0.46
UBE3D-201ENST00000237186 CSRNP1Q96S65 589 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 PARD6BQ9BYG5 372 aa17.95■□□□□ 0.46
UBE3D-201ENST00000237186 A0A1W2PRG0 241 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 POTEB3A0JP26 581 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 POTECB2RU33 542 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 POTEB2H3BUK9 544 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 PPIP5K2O43314 1243 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 KRT86O43790 486 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 MED24O75448 989 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 PNMA6AP0CW24 399 aaPredicted RBP17.94■□□□□ 0.46
UBE3D-201ENST00000237186 RPA1P27694 616 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 GABPB1Q06547 395 aaPredicted RBP17.94■□□□□ 0.46
UBE3D-201ENST00000237186 POTEBQ6S5H4 581 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 GUCA1BQ9UMX6 200 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 COL4A3BPQ9Y5P4 624 aa17.94■□□□□ 0.46
UBE3D-201ENST00000237186 SPDYE2BA6NHP3 402 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 OPLAHO14841 1288 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 IPO7O95373 1038 aaKnown RBP17.93■□□□□ 0.46
UBE3D-201ENST00000237186 LCA5LO95447 670 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 SPDYE6P0CI01 402 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 ARSHQ5FYA8 562 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 CCDC122Q5T0U0 273 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 PAPD7Q5XG87 772 aaKnown RBP17.93■□□□□ 0.46
UBE3D-201ENST00000237186 GPBP1Q86WP2 473 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 CATSPER3Q86XQ3 398 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 MSANTD4Q8NCY6 345 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 ERMNQ8TAM6 284 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 PURBQ96QR8 312 aaKnown RBP17.93■□□□□ 0.46
UBE3D-201ENST00000237186 MYO6Q9UM54 1294 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
UBE3D-201ENST00000237186 CCDC151A5D8V7 595 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 FAM86B1E9PN63 330 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms