RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ABL1P00519 1130 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 JAG1P78504 1218 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 PTGDRQ13258 359 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 VGLL4Q14135 290 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 CERKLQ49MI3 558 aaPredicted RBP22.86■■□□□ 1.25
SNX3-201ENST00000230085 IQCEQ6IPM2 695 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 TMTC3Q6ZXV5 915 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 CCDC102AQ96A19 550 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 ZSCAN10Q96SZ4 725 aaPredicted RBP22.86■■□□□ 1.25
SNX3-201ENST00000230085 MKNK2Q9HBH9 465 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 CREBZFQ9NS37 354 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 VPS54Q9P1Q0 977 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 LUC7L2Q9Y383 392 aaKnown RBP22.86■■□□□ 1.25
SNX3-201ENST00000230085 OTOFQ9HC10 1997 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 PCNTO95613 3336 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 TRIM66O15016 1216 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 RNF40O75150 1001 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 GDF11O95390 407 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 CAP2P40123 477 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 CCT6AP40227 531 aaKnown RBP22.86■■□□□ 1.25
SNX3-201ENST00000230085 CATIPQ7Z7H3 387 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 C10orf67Q8IYJ2 551 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 SMYD4Q8IYR2 804 aaPredicted RBP22.86■■□□□ 1.25
SNX3-201ENST00000230085 ENAHQ8N8S7 591 aaPredicted RBP22.86■■□□□ 1.25
SNX3-201ENST00000230085 PPM1EQ8WY54 764 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 TRERF1Q96PN7 1200 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 TTYH3Q9C0H2 523 aa22.86■■□□□ 1.25
SNX3-201ENST00000230085 CNTNAP5Q8WYK1 1306 aa22.85■■□□□ 1.25
SNX3-201ENST00000230085 EIF3CLB5ME19 914 aaKnown RBP22.85■■□□□ 1.25
SNX3-201ENST00000230085 CTNND1O60716 968 aaKnown RBP22.85■■□□□ 1.25
SNX3-201ENST00000230085 RPN1P04843 607 aaKnown RBP22.85■■□□□ 1.25
SNX3-201ENST00000230085 PRLRP16471 622 aa22.85■■□□□ 1.25
SNX3-201ENST00000230085 HERVK_113P62684 666 aa22.85■■□□□ 1.25
SNX3-201ENST00000230085 EIF3CQ99613 913 aaKnown RBP22.85■■□□□ 1.25
SNX3-201ENST00000230085 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.85■■□□□ 1.25
SNX3-201ENST00000230085 TTC26A0AVF1 554 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 KRT86O43790 486 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 DNM2P50570 870 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 NCAPH2Q6IBW4 605 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 WDR59Q6PJI9 974 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 NUP133Q8WUM0 1156 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 ZKSCAN3Q9BRR0 538 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 VPS16Q9H269 839 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 TAB2Q9NYJ8 693 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 CSADQ9Y600 493 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 CEP350Q5VT06 3117 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 A0A1W2PQJ5 194 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 A6NNZ2 444 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 PARP1P09874 1014 aaKnown RBP22.84■■□□□ 1.25
SNX3-201ENST00000230085 RASA1P20936 1047 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 PPP1R2P41236 205 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 UBXN1Q04323 297 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 TUBB8Q3ZCM7 444 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 RRP12Q5JTH9 1297 aaKnown RBP22.84■■□□□ 1.25
SNX3-201ENST00000230085 WWC2Q6AWC2 1192 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 EFCAB13Q8IY85 973 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 CHP1Q99653 195 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 MAGEF1Q9HAY2 307 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 TAOK2Q9UL54 1235 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.84■■□□□ 1.25
SNX3-201ENST00000230085 SNCAIPQ9Y6H5 919 aa22.84■■□□□ 1.25
SNX3-201ENST00000230085 WNT7AO00755 349 aa22.83■■□□□ 1.24
SNX3-201ENST00000230085 CASP1P29466 404 aa22.83■■□□□ 1.24
SNX3-201ENST00000230085 CYLC1P35663 651 aaPredicted RBP22.83■■□□□ 1.24
SNX3-201ENST00000230085 SCYL3Q8IZE3 742 aa22.83■■□□□ 1.24
SNX3-201ENST00000230085 MMGT1Q8N4V1 131 aa22.83■■□□□ 1.24
SNX3-201ENST00000230085 C4orf32Q8N8J7 132 aa22.83■■□□□ 1.24
SNX3-201ENST00000230085 ELP3Q9H9T3 547 aa22.83■■□□□ 1.24
SNX3-201ENST00000230085 ZNF287Q9HBT7 754 aa22.83■■□□□ 1.24
SNX3-201ENST00000230085 SH3GLB2Q9NR46 395 aa22.83■■□□□ 1.24
SNX3-201ENST00000230085 GH2P01242 217 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 AKR1B1P15121 316 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 HSPA6P17066 643 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 ATP2B1P20020 1258 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 TSR1Q2NL82 804 aaKnown RBP22.82■■□□□ 1.24
SNX3-201ENST00000230085 COBLL1Q53SF7 1204 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 CCNI2Q6ZMN8 369 aaPredicted RBP22.82■■□□□ 1.24
SNX3-201ENST00000230085 GBP6Q6ZN66 633 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 ZNF444Q8N0Y2 327 aaPredicted RBP22.82■■□□□ 1.24
SNX3-201ENST00000230085 CNKSR2Q8WXI2 1034 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 SLC10A4Q96EP9 437 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 TSGA10Q9BZW7 698 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 YY1AP1Q9H869 796 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 TOMM22Q9NS69 142 aa22.82■■□□□ 1.24
SNX3-201ENST00000230085 MPHOSPH10O00566 681 aaKnown RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 HNRNPH3P31942 346 aaKnown RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 PRCPP42785 496 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 STIM1Q13586 685 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 ABCB5Q2M3G0 1257 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 NOL9Q5SY16 702 aaKnown RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 CCDC84Q86UT8 332 aaPredicted RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 CMTR1Q8N1G2 835 aaKnown RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 MMS19Q96T76 1030 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 CUEDC2Q9H467 287 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 ATAD5Q96QE3 1844 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 UNCXA6NJT0 531 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 ORC4O43929 436 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 RHOBTB3O94955 611 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 TFRCP02786 760 aaKnown RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 CALML3P27482 149 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms