RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 PDXDC1Q6P996 788 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 TLDC2A0PJX2 215 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 GRID2IPA4D2P6 1211 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 SMIM23A6NLE4 172 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 SKAP2O75563 359 aaPredicted RBP15.63■□□□□ 0.09
SHPK-201ENST00000225519 STARD3NLO95772 234 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 KLRC1P26715 233 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 SPRED3Q2MJR0 410 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 LRIG3Q6UXM1 1119 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
SHPK-201ENST00000225519 CCDC63Q8NA47 563 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 SWAP70Q9UH65 585 aa15.63■□□□□ 0.09
SHPK-201ENST00000225519 FAM205AQ6ZU69 1335 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 USP17L12C9JPN9 530 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 USP17L21D6R901 530 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 CTNND1O60716 968 aaKnown RBP15.62■□□□□ 0.09
SHPK-201ENST00000225519 HNRNPH3P31942 346 aaKnown RBP15.62■□□□□ 0.09
SHPK-201ENST00000225519 POLR2FP61218 127 aaKnown RBP15.62■□□□□ 0.09
SHPK-201ENST00000225519 DYNLL1P63167 89 aaKnown RBP15.62■□□□□ 0.09
SHPK-201ENST00000225519 CCDC197Q8NCU1 140 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 THOC1Q96FV9 657 aaKnown RBP15.62■□□□□ 0.09
SHPK-201ENST00000225519 PCDHA4Q9UN74 947 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 ERVK-9P63128 1117 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 MTMR3Q13615 1198 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 NAIF1Q69YI7 327 aaPredicted RBP15.62■□□□□ 0.09
SHPK-201ENST00000225519 CCSER1Q9C0I3 900 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 DPH5Q9H2P9 285 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 SCN11AQ9UI33 1791 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 PJA2O43164 708 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 ARMC9Q7Z3E5 817 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 ZSCAN29Q8IWY8 852 aaPredicted RBP15.62■□□□□ 0.09
SHPK-201ENST00000225519 ISCUQ9H1K1 167 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 ADAMTS1Q9UHI8 967 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 SIK3Q9Y2K2 1263 aa15.62■□□□□ 0.09
SHPK-201ENST00000225519 ZNF844Q08AG5 666 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 KLHL30Q0D2K2 578 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 CUL1Q13616 776 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 TXNRD1Q16881 649 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 USP38Q8NB14 1042 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 LSM14BQ9BX40 385 aaKnown RBP15.61■□□□□ 0.09
SHPK-201ENST00000225519 ATP6V0A4Q9HBG4 840 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 NOD2Q9HC29 1040 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 TMOD3Q9NYL9 352 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 ERVV-2B6SEH9 535 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 PPP1R12AO14974 1030 aaPredicted RBP15.61■□□□□ 0.09
SHPK-201ENST00000225519 PEX19P40855 299 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 TECP42680 631 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 NBPF9Q3BBW0 867 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 SV2BQ7L1I2 683 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 TBC1D1Q86TI0 1168 aaPredicted RBP15.61■□□□□ 0.09
SHPK-201ENST00000225519 STAG2Q8N3U4 1231 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 CCDC113Q9H0I3 377 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 DDX47Q9H0S4 455 aaKnown RBP15.61■□□□□ 0.09
SHPK-201ENST00000225519 SEMA6BQ9H3T3 888 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 PCDH11XQ9BZA7 1347 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 PCDH11YQ9BZA8 1340 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 SRRM3A6NNA2 597 aaPredicted RBP15.61■□□□□ 0.09
SHPK-201ENST00000225519 MRPL12P52815 198 aaKnown RBP15.61■□□□□ 0.09
SHPK-201ENST00000225519 DHX9Q08211 1270 aaKnown RBP15.61■□□□□ 0.09
SHPK-201ENST00000225519 MDM1Q8TC05 714 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 CUEDC2Q9H467 287 aa15.61■□□□□ 0.09
SHPK-201ENST00000225519 KRIT1O00522 736 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 CCNT1O60563 726 aaKnown RBP15.6■□□□□ 0.09
SHPK-201ENST00000225519 C4orf32Q8N8J7 132 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 GOLPH3Q9H4A6 298 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 DDX60Q8IY21 1712 aaKnown RBP15.6■□□□□ 0.09
SHPK-201ENST00000225519 SSU72P8A0A1W2PR75 194 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 TRAF5O00463 557 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 SERPING1P05155 500 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 VIMP08670 466 aaKnown RBP15.6■□□□□ 0.09
SHPK-201ENST00000225519 LRRC41Q15345 812 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 FAM133BQ5BKY9 247 aaKnown RBP15.6■□□□□ 0.09
SHPK-201ENST00000225519 C3orf20Q8ND61 904 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 DISP2A7MBM2 1401 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 IGHMBP2P38935 993 aaKnown RBP15.6■□□□□ 0.09
SHPK-201ENST00000225519 EMC10Q5UCC4 262 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 FAM228AQ86W67 206 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 MAGEF1Q9HAY2 307 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 SAMD15Q9P1V8 674 aa15.6■□□□□ 0.09
SHPK-201ENST00000225519 DAPK3O43293 454 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 TRIM37O94972 964 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 NAB2Q15742 525 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 ADGRA1Q86SQ6 560 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 AKAP11Q9UKA4 1901 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 LCA5LO95447 670 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 OR52Z1P0C646 297 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 C1orf131Q8NDD1 294 aaKnown RBP15.59■□□□□ 0.09
SHPK-201ENST00000225519 CHMP6Q96FZ7 201 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 PSMD1Q99460 953 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 CNOT8Q9UFF9 292 aaKnown RBP15.59■□□□□ 0.09
SHPK-201ENST00000225519 ATP8A1Q9Y2Q0 1164 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 KAT6BQ8WYB5 2073 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 SART1O43290 800 aaKnown RBP15.59■□□□□ 0.09
SHPK-201ENST00000225519 CLSTN1O94985 981 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 ATP6V1G2O95670 118 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 SARNPP82979 210 aaKnown RBP15.59■□□□□ 0.09
SHPK-201ENST00000225519 ACCSLQ4AC99 568 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 FAM83BQ5T0W9 1011 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 TAX1BP1Q86VP1 789 aa15.59■□□□□ 0.09
SHPK-201ENST00000225519 KIAA0895Q8NCT3 520 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms