RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 NBPF10Q6P3W6 841 aaKnown RBP20.13■□□□□ 0.81
CLIP2-201ENST00000223398 NBPF15Q8N660 670 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 CACTINQ8WUQ7 758 aaKnown RBP20.13■□□□□ 0.81
CLIP2-201ENST00000223398 CEP95Q96GE4 821 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 PTPREP23469 700 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 GUCY2FP51841 1108 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 DGKHQ86XP1 1220 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 PCDHA6Q9UN73 950 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 PCDHA8Q9Y5H6 950 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 EBAG9O00559 213 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 ELF2Q15723 593 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 FYB2Q5VWT5 728 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 PDZD4Q76G19 769 aaPredicted RBP20.13■□□□□ 0.81
CLIP2-201ENST00000223398 P2RX5Q93086 422 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 KRT12Q99456 494 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 PARVGQ9HBI0 331 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 GJB4Q9NTQ9 266 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 SAR1BQ9Y6B6 198 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 CLTCL1P53675 1640 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 BHMT2Q9H2M3 363 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 RIOK3O14730 519 aaKnown RBP20.13■□□□□ 0.81
CLIP2-201ENST00000223398 CD2BP2O95400 341 aaKnown RBP20.13■□□□□ 0.81
CLIP2-201ENST00000223398 MTMR1Q13613 665 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 GSDMAQ96QA5 445 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 DCP1AQ9NPI6 582 aaPredicted RBP20.13■□□□□ 0.81
CLIP2-201ENST00000223398 ABCB11O95342 1321 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 GOLGA6CA6NDK9 693 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 GOLGA6BA6NDN3 693 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 GOLGA6DP0CG33 693 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 LIFRP42702 1097 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 PAK2Q13177 524 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 TUBB2AQ13885 445 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 STXBP2Q15833 593 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 VPS72Q15906 364 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 TTBK2Q6IQ55 1244 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 CATSPER4Q7RTX7 472 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 SP8Q8IXZ3 490 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 TUBB2BQ9BVA1 445 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.12■□□□□ 0.813e-6■■■■□ 26.6
CLIP2-201ENST00000223398 GOLGA6AQ9NYA3 693 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 CDHR2Q9BYE9 1310 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 H7C0C1 242 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
CLIP2-201ENST00000223398 ATP5OP48047 213 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 EPSTI1Q96J88 318 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 DPH5Q9H2P9 285 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 POLR3EQ9NVU0 708 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 INPP5FQ9Y2H2 1132 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 GOLGA8FQ08AF8 430 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 GOLGA8DPQ0D2H9 430 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 KSR1Q8IVT5 923 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 TRIM58Q8NG06 486 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 DDX41Q9UJV9 622 aaKnown RBP20.12■□□□□ 0.81
CLIP2-201ENST00000223398 UTYO14607 1347 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 ZNF521Q96K83 1311 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 PEX3P56589 373 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 RASSF7Q02833 373 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 TSTA3Q13630 321 aaPredicted RBP20.12■□□□□ 0.81
CLIP2-201ENST00000223398 LLGL1Q15334 1064 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 BANK1Q8NDB2 785 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 GPT2Q8TD30 523 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 HINFPQ9BQA5 517 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 RNF146Q9NTX7 359 aa20.12■□□□□ 0.81
CLIP2-201ENST00000223398 THNSL1Q8IYQ7 743 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 SKA2Q8WVK7 121 aaPredicted RBP20.11■□□□□ 0.81
CLIP2-201ENST00000223398 ISCA1Q9BUE6 129 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 TMEM206Q9H813 350 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 A0A1W2PQ27 194 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 A0A1W2PQ64 194 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 A0A1W2PQD8 194 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 ZBTB5O15062 677 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 MGARPQ8TDB4 240 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 ZNF668Q96K58 619 aaPredicted RBP20.11■□□□□ 0.81
CLIP2-201ENST00000223398 EMILIN3Q9NT22 766 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 POLIQ9UNA4 740 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 BFSP1Q12934 665 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 STAG1Q8WVM7 1258 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 POLD4Q9HCU8 107 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 RIC8AQ9NPQ8 531 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 FEZ2Q9UHY8 353 aaPredicted RBP20.11■□□□□ 0.81
CLIP2-201ENST00000223398 FEM1BQ9UK73 627 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 K7ERI5 159 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 SARNPP82979 210 aaKnown RBP20.11■□□□□ 0.81
CLIP2-201ENST00000223398 MICALL2Q8IY33 904 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.11■□□□□ 0.81
CLIP2-201ENST00000223398 SLC4A1P02730 911 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 CASP14P31944 242 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 SRGAP1Q7Z6B7 1085 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.11■□□□□ 0.81
CLIP2-201ENST00000223398 ZNF148Q9UQR1 794 aa20.11■□□□□ 0.81
CLIP2-201ENST00000223398 MNAT1P51948 309 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 CYB5R4Q7L1T6 521 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 RFX6Q8HWS3 928 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 FAM84BQ96KN1 310 aaPredicted RBP20.1■□□□□ 0.81
CLIP2-201ENST00000223398 PTCH1Q13635 1447 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 IGSF3O75054 1194 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 KIF11P52732 1056 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 BPIFB4P59827 614 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 HAUS1Q96CS2 278 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 MSTO1Q9BUK6 570 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms