RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 EHMT1Q9H9B1 1298 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 MYH3P11055 1940 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 PLEKP08567 350 aaPredicted RBP16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 XRCC5P13010 732 aaKnown RBP16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 TM4SF1P30408 202 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 STAT3P40763 770 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 ABCB5Q2M3G0 1257 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 CCDC174Q6PII3 467 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 TMC4Q7Z404 712 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 FAM76AQ8TAV0 307 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 GJD4Q96KN9 370 aaPredicted RBP16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 DUSP9Q99956 384 aaKnown RBP16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 FUT8Q9BYC5 575 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 RABEP2Q9H5N1 569 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 JMJD4Q9H9V9 463 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 ORC2Q13416 577 aaPredicted RBP16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 DNAJC7Q99615 494 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 CALUO43852 315 aaPredicted RBP16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 KLRC4O43908 158 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 SASH3O75995 380 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 IVLP07476 585 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 GFPT1Q06210 699 aaPredicted RBP16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 TNIP1Q15025 636 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 MAEAQ7L5Y9 396 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 MYO5AQ9Y4I1 1855 aaKnown RBP16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 HOXA13P31271 388 aaPredicted RBP16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 CRKP46108 304 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 SLC7A5Q01650 507 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 PDIA5Q14554 519 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 SEPT2Q15019 361 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 KLHL7Q8IXQ5 586 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 FAM71BQ8TC56 605 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 FAM204AQ9H8W3 233 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 BCCIPQ9P287 314 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 ADAMTS1Q9UHI8 967 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 ZRANB2O95218 330 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 GYS1P13807 737 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 PDE6BP35913 854 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 HNRNPH2P55795 449 aaKnown RBP16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 EHHADHQ08426 723 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 IRF2BP1Q8IU81 584 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 FNBP4Q8N3X1 1017 aaPredicted RBP16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 OGFOD1Q8N543 542 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 SEMA6BQ9H3T3 888 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 ZBTB21Q9ULJ3 1066 aa16.48■□□□□ 0.23
UBE2D4-201ENST00000222402 SHTN1A0MZ66 631 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 POTEFA5A3E0 1075 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 GOLGA6CA6NDK9 693 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 OPA1O60313 960 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 FTCDO95954 541 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 GOLGA6DP0CG33 693 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 POTEIP0CG38 1075 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 POTEGQ6S5H5 508 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 POTEEQ6S8J3 1075 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 SELENOOQ9BVL4 669 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 GOLGA6AQ9NYA3 693 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 PI4KBQ9UBF8 816 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 TRPC5Q9UL62 973 aaPredicted RBP16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 UBR2Q8IWV8 1755 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 ESYT2A0FGR8 921 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 UBXN2AP68543 259 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 CCDC155Q8N6L0 562 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 KIAA0895Q8NCT3 520 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 MED4Q9NPJ6 270 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 COL14A1Q05707 1796 aaKnown RBP16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 NPHP3-ACAD11A0A0J9YXS1 232 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 USP14P54578 494 aa16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 QTRT2Q9H974 415 aaKnown RBP16.47■□□□□ 0.23
UBE2D4-201ENST00000222402 H0YIN7 160 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 CEP104O60308 925 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 RNF40O75150 1001 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 ARHGAP25P42331 645 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 HERVK_113P62684 666 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 TRAF1Q13077 416 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 CFAP58Q5T655 872 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 NFRKBQ6P4R8 1299 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 ANKZF1Q9H8Y5 726 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 ANO9A1A5B4 782 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 PSMD14O00487 310 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 CLIC2O15247 247 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 NCK2O43639 380 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 TNNC1P63316 161 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 SP8Q8IXZ3 490 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 C10orf67Q8IYJ2 551 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 RDH13Q8NBN7 331 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 EXOC4Q96A65 974 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 FANCGO15287 622 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 ERLIN2O94905 339 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 PRPF6O94906 941 aaKnown RBP16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 SMARCA1P28370 1054 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 EXOC3L4Q17RC7 722 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 FAM83BQ5T0W9 1011 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 ERGIC2Q96RQ1 377 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 RIOX1Q9H6W3 641 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms