RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 OPA1O60313 960 aa14.96□□□□□ -0.01
RAB3D-201ENST00000222120 DLGAP5Q15398 846 aa14.96□□□□□ -0.01
RAB3D-201ENST00000222120 ANKRD65E5RJM6 399 aa14.96□□□□□ -0.02
RAB3D-201ENST00000222120 PLEKP08567 350 aaPredicted RBP14.96□□□□□ -0.02
RAB3D-201ENST00000222120 CRKP46108 304 aa14.96□□□□□ -0.02
RAB3D-201ENST00000222120 TNNC1P63316 161 aa14.96□□□□□ -0.02
RAB3D-201ENST00000222120 FAM204AQ9H8W3 233 aa14.96□□□□□ -0.02
RAB3D-201ENST00000222120 POLLQ9UGP5 575 aa14.96□□□□□ -0.02
RAB3D-201ENST00000222120 KDM3BQ7LBC6 1761 aa14.96□□□□□ -0.02
RAB3D-201ENST00000222120 ATP1A2P50993 1020 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 GUCY2DQ02846 1103 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 CTTNQ14247 550 aaKnown RBP14.95□□□□□ -0.02
RAB3D-201ENST00000222120 EXOC3L4Q17RC7 722 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 PEX26Q7Z412 305 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 GPATCH11Q8N954 259 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 UBLCP1Q8WVY7 318 aaPredicted RBP14.95□□□□□ -0.02
RAB3D-201ENST00000222120 SMARCAL1Q9NZC9 954 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 SWAP70Q9UH65 585 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 TRPC5Q9UL62 973 aaPredicted RBP14.95□□□□□ -0.02
RAB3D-201ENST00000222120 SLC37A4O43826 429 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 RHOBTB3O94955 611 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 TNFAIP3P21580 790 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 RC3H1Q5TC82 1133 aaKnown RBP14.95□□□□□ -0.02
RAB3D-201ENST00000222120 TMED8Q6PL24 325 aaPredicted RBP14.95□□□□□ -0.02
RAB3D-201ENST00000222120 BARGINQ6ZT62 677 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 ZMYND12Q9H0C1 365 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 ADAM21Q9UKJ8 722 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 KIF1AQ12756 1690 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 COASYQ13057 564 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 GIMAP8Q8ND71 665 aaPredicted RBP14.95□□□□□ -0.02
RAB3D-201ENST00000222120 RAD54LQ92698 747 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 PI4KBQ9UBF8 816 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 RABGAP1Q9Y3P9 1069 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 CDKAL1Q5VV42 579 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 NFRKBQ6P4R8 1299 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 C16orf86Q6ZW13 317 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 FAM178BQ8IXR5 827 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 MMS19Q96T76 1030 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 CAPN11Q9UMQ6 739 aa14.95□□□□□ -0.02
RAB3D-201ENST00000222120 PACSIN2Q9UNF0 486 aaPredicted RBP14.95□□□□□ -0.02
RAB3D-201ENST00000222120 AFF2P51816 1311 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 PALM3A6NDB9 673 aaPredicted RBP14.94□□□□□ -0.02
RAB3D-201ENST00000222120 TCP1P17987 556 aaKnown RBP14.94□□□□□ -0.02
RAB3D-201ENST00000222120 KCNB1Q14721 858 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 CCDC25Q86WR0 208 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 CCDC170Q8IYT3 715 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 GJD4Q96KN9 370 aaPredicted RBP14.94□□□□□ -0.02
RAB3D-201ENST00000222120 KRT12Q99456 494 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 ADAMTS3O15072 1205 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 BMP3P12645 472 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 GTF2A1P52655 376 aaPredicted RBP14.94□□□□□ -0.02
RAB3D-201ENST00000222120 IL17AQ16552 155 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 SLFN12Q8IYM2 578 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 HSD3B7Q9H2F3 369 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 RIC8AQ9NPQ8 531 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 CNTNAP4Q9C0A0 1308 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 FLOT1O75955 427 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 IVLP07476 585 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 NT5DC1Q5TFE4 455 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 LRCH2Q5VUJ6 765 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 DAAM2Q86T65 1068 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 LMBR1Q8WVP7 490 aa14.94□□□□□ -0.02
RAB3D-201ENST00000222120 SCAF8Q9UPN6 1271 aaKnown RBP14.94□□□□□ -0.02
RAB3D-201ENST00000222120 GSTTP1A0A1W2PQM5 241 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 ABL1P00519 1130 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 ALAS1P13196 640 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 FUT2Q10981 343 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 NFIAQ12857 509 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 TRAF1Q13077 416 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 PRKG1Q13976 671 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 VPS72Q15906 364 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 ODR4Q5SWX8 454 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 KRT27Q7Z3Y8 459 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 IFT20Q8IY31 132 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 GPR75-ASB3A0A0A6YYF3 556 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 FAM237AA0A1B0GTK4 181 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 F5H6K3 240 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 LRRN2O75325 713 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 HARSP12081 509 aaKnown RBP14.93□□□□□ -0.02
RAB3D-201ENST00000222120 HNRNPH2P55795 449 aaKnown RBP14.93□□□□□ -0.02
RAB3D-201ENST00000222120 KLRC3Q07444 240 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 ZNF384Q8TF68 577 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 BCS1LQ9Y276 419 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 RNF40O75150 1001 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 CCDC172P0C7W6 258 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 ELOA2Q8IYF1 753 aaPredicted RBP14.93□□□□□ -0.02
RAB3D-201ENST00000222120 DYDC1Q8WWB3 177 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 RPGRIP1Q96KN7 1286 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 RTFDC1Q9BY42 306 aaPredicted RBP14.93□□□□□ -0.02
RAB3D-201ENST00000222120 JRKLQ9Y4A0 524 aa14.93□□□□□ -0.02
RAB3D-201ENST00000222120 RDXP35241 583 aaKnown RBP14.92□□□□□ -0.02
RAB3D-201ENST00000222120 STAT1P42224 750 aa14.92□□□□□ -0.02
RAB3D-201ENST00000222120 ARHGAP4P98171 946 aa14.92□□□□□ -0.02
RAB3D-201ENST00000222120 LRRC63Q05C16 580 aa14.92□□□□□ -0.02
RAB3D-201ENST00000222120 ZNF543Q08ER8 600 aa14.92□□□□□ -0.02
RAB3D-201ENST00000222120 TBX2Q13207 712 aaPredicted RBP14.92□□□□□ -0.02
RAB3D-201ENST00000222120 SFR1Q86XK3 245 aa14.92□□□□□ -0.02
RAB3D-201ENST00000222120 LACRTQ9GZZ8 138 aa14.92□□□□□ -0.02
RAB3D-201ENST00000222120 PCIF1Q9H4Z3 704 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms