RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 PLAGL2Q9UPG8 496 aa16.95■□□□□ 0.3
TGFB1-201ENST00000221930 PPP1R11O60927 126 aaPredicted RBP16.94■□□□□ 0.3
TGFB1-201ENST00000221930 EIF3JO75822 258 aaKnown RBP16.94■□□□□ 0.3
TGFB1-201ENST00000221930 SRLQ86TD4 932 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 GSPT2Q8IYD1 628 aaKnown RBP16.94■□□□□ 0.3
TGFB1-201ENST00000221930 IFIH1Q9BYX4 1025 aaKnown RBP16.94■□□□□ 0.3
TGFB1-201ENST00000221930 GBP3Q9H0R5 595 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 CAPN6Q9Y6Q1 641 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 GAKO14976 1311 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 NOVP48745 357 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 VAV2P52735 878 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 KRT79Q5XKE5 535 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 RRAGAQ7L523 313 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 ADGRF4Q8IZF3 695 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 RAD54LQ92698 747 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 PSMB7Q99436 277 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 DEF6Q9H4E7 631 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 JMJD4Q9H9V9 463 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 MLXIPQ9HAP2 919 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 STK17AQ9UEE5 414 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 A0A1W2PQJ5 194 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 RAD21O60216 631 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 SSBP05455 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
TGFB1-201ENST00000221930 EIF4A3P38919 411 aaKnown RBP16.94■□□□□ 0.3
TGFB1-201ENST00000221930 PPP1R2P41236 205 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 FIGNQ5HY92 759 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 ZNF662Q6ZS27 426 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 TBC1D7Q9P0N9 293 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 LCMT1Q9UIC8 334 aa16.94■□□□□ 0.3
TGFB1-201ENST00000221930 LRRC53A6NM62 1247 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 SWT1Q5T5J6 900 aaKnown RBP16.93■□□□□ 0.3
TGFB1-201ENST00000221930 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 ANKRD13CQ8N6S4 541 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 EXOC4Q96A65 974 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 TANGO6Q9C0B7 1094 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 C10orf71Q711Q0 1435 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 PVALEFA0A1B0GWK0 134 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 KIF11P52732 1056 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 MRPS25P82663 173 aaKnown RBP16.93■□□□□ 0.3
TGFB1-201ENST00000221930 C2orf54Q08AI8 447 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 ASPRV1Q53RT3 343 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 GUF1Q8N442 669 aaKnown RBP16.93■□□□□ 0.3
TGFB1-201ENST00000221930 RAB34Q9BZG1 259 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 KANSL2Q9H9L4 492 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 PCDHA13Q9Y5I0 950 aa16.93■□□□□ 0.3
TGFB1-201ENST00000221930 MPHOSPH10O00566 681 aaKnown RBP16.92■□□□□ 0.3
TGFB1-201ENST00000221930 AKR1B10O60218 316 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 MARCH6O60337 910 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 TRIM37O94972 964 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 MOCS3O95396 460 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 MYBL2P10244 700 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 SCNN1DP51172 638 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 GABPAQ06546 454 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 DDR1Q08345 913 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 ZSCAN26Q16670 478 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 MAN2A1Q16706 1144 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 COBLL1Q53SF7 1204 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 LRRC55Q6ZSA7 311 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 HAS1Q92839 578 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 PURBQ96QR8 312 aaKnown RBP16.92■□□□□ 0.3
TGFB1-201ENST00000221930 DDX25Q9UHL0 483 aaKnown RBP16.92■□□□□ 0.3
TGFB1-201ENST00000221930 TUBBP07437 444 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 CXCR5P32302 372 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 PDIA5Q14554 519 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 HSP90B2PQ58FF3 399 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 FGFBP2Q9BYJ0 223 aa16.92■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L10C9JJH3 530 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 TTLL1O95922 423 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 SNHG28P0DPA3 235 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 CDK17Q00537 523 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
TGFB1-201ENST00000221930 ZNF543Q08ER8 600 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 TTC31Q49AM3 519 aaPredicted RBP16.91■□□□□ 0.3
TGFB1-201ENST00000221930 COG1Q8WTW3 980 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 COL11A2P13942 1736 aaPredicted RBP16.91■□□□□ 0.3
TGFB1-201ENST00000221930 PNMA6FA0A0J9YX94 578 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 NPR1P16066 1061 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 ORC2Q13416 577 aaPredicted RBP16.91■□□□□ 0.3
TGFB1-201ENST00000221930 PROM2Q8N271 834 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 NLRC4Q9NPP4 1024 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 RIC8AQ9NPQ8 531 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 SERPINB13Q9UIV8 391 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 ATP6V0A2Q9Y487 856 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 MYH10P35580 1976 aa16.91■□□□□ 0.3
TGFB1-201ENST00000221930 ANO9A1A5B4 782 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 HNRNPH3P31942 346 aaKnown RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 APBA1Q02410 837 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 MAP2K1Q02750 393 aaPredicted RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 CKAP4Q07065 602 aaKnown RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 CCDC84Q86UT8 332 aaPredicted RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 CERS5Q8N5B7 392 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 SH2D4AQ9H788 454 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 SMARCAL1Q9NZC9 954 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 SUFUQ9UMX1 484 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms