RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 CD58P19256 250 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 ELF1P32519 619 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 ASPHQ12797 758 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 SPATA17Q96L03 361 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 IFT122Q9HBG6 1241 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 LMBRD1Q9NUN5 540 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 KDM5CP41229 1560 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 CIAO1O76071 339 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 PCP11498 1178 aaKnown RBP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 STX1BP61266 288 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 OR6B2Q6IFH4 312 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 ELMSAN1Q6PJG2 1045 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 DNAAF3Q8N9W5 541 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 CDC26Q8NHZ8 85 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 SLC10A4Q96EP9 437 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 BAIAP2L1Q9UHR4 511 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 MOSPD1Q9UJG1 213 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 A0A1B0GUA9 196 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 BMP3P12645 472 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 PDIA3P30101 505 aaKnown RBP12.03□□□□□ -0.48
KNOP1-201ENST00000219837 DDIT3P35638 169 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 TMED2Q15363 201 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.03□□□□□ -0.48
KNOP1-201ENST00000219837 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 WDR64B1ANS9 1081 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 LRRN2O75325 713 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 RCN2Q14257 317 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 RNF139Q8WU17 664 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 USP28Q96RU2 1077 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 Q9H521 79 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 BTBD18B2RXH4 712 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 STMN1P16949 149 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 NR2F2P24468 414 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 ARL4AP40617 200 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 EPHB1P54762 984 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 LMNB2Q03252 620 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 SUDS3Q9H7L9 328 aaPredicted RBP12.03□□□□□ -0.48
KNOP1-201ENST00000219837 ORC6Q9Y5N6 252 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 FAM186BQ8IYM0 893 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 TBCKQ8TEA7 893 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 FANCLQ9NW38 375 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 ITM2BQ9Y287 266 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 GSPT1P15170 499 aaKnown RBP12.03□□□□□ -0.48
KNOP1-201ENST00000219837 GPATCH4Q5T3I0 446 aaKnown RBP12.03□□□□□ -0.48
KNOP1-201ENST00000219837 SPATA1Q5VX52 437 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 RPGRIP1Q96KN7 1286 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 TMEM206Q9H813 350 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 MAGEF1Q9HAY2 307 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 LRRC4Q9HBW1 653 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 TLR7Q9NYK1 1049 aaKnown RBP12.03□□□□□ -0.48
KNOP1-201ENST00000219837 PCDHA7Q9UN72 937 aa12.03□□□□□ -0.48
KNOP1-201ENST00000219837 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.48
KNOP1-201ENST00000219837 CMA1P23946 247 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 EHHADHQ08426 723 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 GOLGA8FQ08AF8 430 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 GOLGA8DPQ0D2H9 430 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 RWDD4Q6NW29 188 aaKnown RBP12.02□□□□□ -0.48
KNOP1-201ENST00000219837 STK17AQ9UEE5 414 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 GOLGA8QA0A0J9YX86 632 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 GOLGA8OA6NCC3 632 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 GOLGA8NF8WBI6 632 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 ADCY1Q08828 1119 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 C2orf54Q08AI8 447 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 IL17REQ8NFR9 667 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 CCDC17Q96LX7 622 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 HOMER3Q9NSC5 361 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 ABCC12Q96J65 1359 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 TMEM2Q9UHN6 1383 aa12.02□□□□□ -0.48
KNOP1-201ENST00000219837 PZPP20742 1482 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 PPP2R5EQ16537 467 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 MMTAG2Q9BU76 263 aaKnown RBP12.02□□□□□ -0.49
KNOP1-201ENST00000219837 ZWILCHQ9H900 591 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 SART1O43290 800 aaKnown RBP12.02□□□□□ -0.49
KNOP1-201ENST00000219837 EEF1GP26641 437 aaKnown RBP12.02□□□□□ -0.49
KNOP1-201ENST00000219837 HOXA13P31271 388 aaPredicted RBP12.02□□□□□ -0.49
KNOP1-201ENST00000219837 RBL2Q08999 1139 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 NSUN2Q08J23 767 aaKnown RBP eCLIP12.02□□□□□ -0.49
KNOP1-201ENST00000219837 TRIML1Q8N9V2 468 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 WHAMMQ8TF30 809 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 CARMIL3Q8ND23 1372 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 PPP1R12AO14974 1030 aaPredicted RBP12.02□□□□□ -0.49
KNOP1-201ENST00000219837 GFPT2O94808 682 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 CFAP61Q8NHU2 1237 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 DYNLL2Q96FJ2 89 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 GCNT4Q9P109 453 aa12.02□□□□□ -0.49
KNOP1-201ENST00000219837 FBXW4P57775 412 aa12.01□□□□□ -0.49
KNOP1-201ENST00000219837 DNAJC24Q6P3W2 148 aa12.01□□□□□ -0.49
KNOP1-201ENST00000219837 THEM5Q8N1Q8 247 aa12.01□□□□□ -0.49
KNOP1-201ENST00000219837 NLRP4Q96MN2 994 aa12.01□□□□□ -0.49
KNOP1-201ENST00000219837 CAPS2Q9BXY5 557 aa12.01□□□□□ -0.49
KNOP1-201ENST00000219837 SPECC1L-ADORA2AF8WAN1 911 aa12.01□□□□□ -0.49
KNOP1-201ENST00000219837 GPC4O75487 556 aa12.01□□□□□ -0.49
KNOP1-201ENST00000219837 PDE8BO95263 885 aa12.01□□□□□ -0.49
KNOP1-201ENST00000219837 ABCD1P33897 745 aa12.01□□□□□ -0.49
KNOP1-201ENST00000219837 CDC37Q16543 378 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms