RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 MED24O75448 989 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 PLA2G4BP0C869 781 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 IDEP14735 1019 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 ZNF76P36508 570 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 CREBRFQ8IUR6 639 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 KIAA1683Q9H0B3 1180 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 SEMA6BQ9H3T3 888 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 IGLV3-22A0A075B6J6 115 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 A0A1W2PQC6 194 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 E9PMD0 336 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 WDR46O15213 610 aaKnown RBP33.11■■■□□ 2.89
PABPN1-201ENST00000216727 RPA1P27694 616 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 PRELPP51888 382 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 UBXN1Q04323 297 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 SAMD7Q7Z3H4 446 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 LDHDQ86WU2 507 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 TBC1D5Q92609 795 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 UIMC1Q96RL1 719 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 EHMT1Q9H9B1 1298 aa33.11■■■□□ 2.89
PABPN1-201ENST00000216727 CASP14P31944 242 aa33.1■■■□□ 2.89
PABPN1-201ENST00000216727 ZNF507Q8TCN5 953 aa33.1■■■□□ 2.89
PABPN1-201ENST00000216727 HACL1Q9UJ83 578 aa33.1■■■□□ 2.89
PABPN1-201ENST00000216727 VAV3Q9UKW4 847 aa33.1■■■□□ 2.89
PABPN1-201ENST00000216727 FECHP22830 423 aa33.09■■■□□ 2.89
PABPN1-201ENST00000216727 CATSPER3Q86XQ3 398 aa33.09■■■□□ 2.89
PABPN1-201ENST00000216727 KIF18AQ8NI77 898 aa33.09■■■□□ 2.89
PABPN1-201ENST00000216727 MB21D1Q8N884 522 aa33.09■■■□□ 2.89
PABPN1-201ENST00000216727 CYP2W1Q8TAV3 490 aa33.09■■■□□ 2.89
PABPN1-201ENST00000216727 GJA3Q9Y6H8 435 aa33.09■■■□□ 2.89
PABPN1-201ENST00000216727 ICAM1P05362 532 aa33.08■■■□□ 2.89
PABPN1-201ENST00000216727 INPP5BP32019 993 aa33.08■■■□□ 2.89
PABPN1-201ENST00000216727 COASYQ13057 564 aa33.08■■■□□ 2.89
PABPN1-201ENST00000216727 TBC1D10BQ4KMP7 808 aaPredicted RBP33.08■■■□□ 2.89
PABPN1-201ENST00000216727 NCAPH2Q6IBW4 605 aa33.08■■■□□ 2.89
PABPN1-201ENST00000216727 REXO1L1PQ8IX06 675 aa33.08■■■□□ 2.89
PABPN1-201ENST00000216727 KCTD17Q8N5Z5 321 aa33.08■■■□□ 2.89
PABPN1-201ENST00000216727 PRPF38AQ8NAV1 312 aaKnown RBP33.08■■■□□ 2.89
PABPN1-201ENST00000216727 ZNF592Q92610 1267 aa33.08■■■□□ 2.89
PABPN1-201ENST00000216727 PPP2R2CQ9Y2T4 447 aa33.08■■■□□ 2.89
PABPN1-201ENST00000216727 FXR1P51114 621 aaKnown RBP eCLIP33.07■■■□□ 2.89
PABPN1-201ENST00000216727 LRRC63Q05C16 580 aa33.07■■■□□ 2.89
PABPN1-201ENST00000216727 KIF4BQ2VIQ3 1234 aa33.07■■■□□ 2.89
PABPN1-201ENST00000216727 CPLX3Q8WVH0 158 aa33.07■■■□□ 2.89
PABPN1-201ENST00000216727 TUBGCP2Q9BSJ2 902 aa33.07■■■□□ 2.89
PABPN1-201ENST00000216727 SPATA31C1P0DKV0 1188 aa33.07■■■□□ 2.88
PABPN1-201ENST00000216727 DNM2P50570 870 aa33.07■■■□□ 2.88
PABPN1-201ENST00000216727 CNOT6LQ96LI5 555 aaKnown RBP33.07■■■□□ 2.88
PABPN1-201ENST00000216727 PANK4Q9NVE7 773 aa33.07■■■□□ 2.88
PABPN1-201ENST00000216727 ASTN2O75129 1339 aaPredicted RBP33.06■■■□□ 2.88
PABPN1-201ENST00000216727 PITPNM2Q9BZ72 1349 aa33.06■■■□□ 2.88
PABPN1-201ENST00000216727 GOLGA6L9A6NEM1 432 aa33.06■■■□□ 2.88
PABPN1-201ENST00000216727 SLC12A3P55017 1021 aa33.06■■■□□ 2.88
PABPN1-201ENST00000216727 CCDC65Q8IXS2 484 aa33.06■■■□□ 2.88
PABPN1-201ENST00000216727 SLF1Q9BQI6 1058 aa33.06■■■□□ 2.88
PABPN1-201ENST00000216727 SSBP05455 408 aaKnown RBP eCLIP33.06■■■□□ 2.88
PABPN1-201ENST00000216727 CYP11B2P19099 503 aa33.06■■■□□ 2.88
PABPN1-201ENST00000216727 GPBP1Q86WP2 473 aa33.06■■■□□ 2.88
PABPN1-201ENST00000216727 ZNF536O15090 1300 aa33.05■■■□□ 2.88
PABPN1-201ENST00000216727 POTEFA5A3E0 1075 aa33.05■■■□□ 2.88
PABPN1-201ENST00000216727 FGFR1OPO95684 399 aaKnown RBP33.05■■■□□ 2.88
PABPN1-201ENST00000216727 POTEIP0CG38 1075 aa33.05■■■□□ 2.88
PABPN1-201ENST00000216727 POTEGQ6S5H5 508 aa33.05■■■□□ 2.88
PABPN1-201ENST00000216727 POTEEQ6S8J3 1075 aa33.05■■■□□ 2.88
PABPN1-201ENST00000216727 POLR3CQ9BUI4 534 aaPredicted RBP33.05■■■□□ 2.88
PABPN1-201ENST00000216727 FAM26FQ5R3K3 315 aa33.04■■■□□ 2.88
PABPN1-201ENST00000216727 WDR18Q9BV38 432 aa33.04■■■□□ 2.88
PABPN1-201ENST00000216727 DNM3Q9UQ16 869 aa33.04■■■□□ 2.88
PABPN1-201ENST00000216727 FRMD3A2A2Y4 597 aa33.04■■■□□ 2.88
PABPN1-201ENST00000216727 CTIFO43310 598 aaKnown RBP33.04■■■□□ 2.88
PABPN1-201ENST00000216727 MYOCDQ8IZQ8 938 aa33.04■■■□□ 2.88
PABPN1-201ENST00000216727 CCPG1Q9ULG6 757 aa33.04■■■□□ 2.88
PABPN1-201ENST00000216727 PRKCSHP14314 528 aaPredicted RBP33.03■■■□□ 2.88
PABPN1-201ENST00000216727 HSD17B4P51659 736 aa33.03■■■□□ 2.88
PABPN1-201ENST00000216727 ETF1P62495 437 aaKnown RBP33.03■■■□□ 2.88
PABPN1-201ENST00000216727 DCAF15Q66K64 600 aa33.03■■■□□ 2.88
PABPN1-201ENST00000216727 TOGARAM2Q6ZUX3 1019 aa33.03■■■□□ 2.88
PABPN1-201ENST00000216727 RABGAP1Q9Y3P9 1069 aa33.03■■■□□ 2.88
PABPN1-201ENST00000216727 CEP55Q53EZ4 464 aa33.02■■■□□ 2.88
PABPN1-201ENST00000216727 SLC5A5Q92911 643 aa33.02■■■□□ 2.88
PABPN1-201ENST00000216727 ABHD10Q9NUJ1 306 aa33.02■■■□□ 2.88
PABPN1-201ENST00000216727 PCDHA2Q9Y5H9 948 aa33.02■■■□□ 2.88
PABPN1-201ENST00000216727 GHRHRQ02643 423 aa33.02■■■□□ 2.88
PABPN1-201ENST00000216727 ARSHQ5FYA8 562 aa33.02■■■□□ 2.88
PABPN1-201ENST00000216727 NBPF12Q5TAG4 269 aaPredicted RBP33.02■■■□□ 2.88
PABPN1-201ENST00000216727 SAMD1Q6SPF0 538 aaPredicted RBP33.02■■■□□ 2.88
PABPN1-201ENST00000216727 SYT2Q8N9I0 419 aaPredicted RBP33.02■■■□□ 2.88
PABPN1-201ENST00000216727 AGBL1Q96MI9 1066 aa33.02■■■□□ 2.88
PABPN1-201ENST00000216727 ZNF541Q9H0D2 1346 aa33.01■■■□□ 2.88
PABPN1-201ENST00000216727 MTIF2P46199 727 aaKnown RBP33.01■■■□□ 2.88
PABPN1-201ENST00000216727 HOOK2Q96ED9 719 aa33.01■■■□□ 2.88
PABPN1-201ENST00000216727 B4DLN1 442 aa33.01■■■□□ 2.87
PABPN1-201ENST00000216727 PSMD10O75832 226 aa33.01■■■□□ 2.87
PABPN1-201ENST00000216727 OTOP1Q7RTM1 612 aa33.01■■■□□ 2.87
PABPN1-201ENST00000216727 TMTC1Q8IUR5 882 aa33.01■■■□□ 2.87
PABPN1-201ENST00000216727 TSG101Q99816 390 aa33.01■■■□□ 2.87
PABPN1-201ENST00000216727 SOWAHDA6NJG2 315 aa33■■■□□ 2.87
PABPN1-201ENST00000216727 SETQ01105 290 aaPredicted RBP33■■■□□ 2.87
PABPN1-201ENST00000216727 PPP2R5CQ13362 524 aa33■■■□□ 2.87
PABPN1-201ENST00000216727 MIIPQ5JXC2 388 aa33■■■□□ 2.87
PABPN1-201ENST00000216727 TRIM65Q6PJ69 517 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms