RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 CENPPQ6IPU0 288 aa18.93■□□□□ 0.62
PHGDH-229ENST00000641891 MNS1Q8NEH6 495 aa18.93■□□□□ 0.62
PHGDH-229ENST00000641891 GMCL1Q96IK5 515 aa18.93■□□□□ 0.62
PHGDH-229ENST00000641891 SLF1Q9BQI6 1058 aa18.93■□□□□ 0.62
PHGDH-229ENST00000641891 TADA3O75528 432 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 RAD17O75943 681 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 NOC4LQ9BVI4 516 aaKnown RBP18.92■□□□□ 0.62
PHGDH-229ENST00000641891 AMNQ9BXJ7 453 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 KCNMB3Q9NPA1 279 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 STK32BQ9NY57 414 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 MRFAP1Q9Y605 127 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 E9PMD0 336 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 SSBP05455 408 aaKnown RBP eCLIP18.92■□□□□ 0.62
PHGDH-229ENST00000641891 PPP1R2P41236 205 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 TBC1D8BQ0IIM8 1120 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 FBXO11Q86XK2 927 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 FAM114A1Q8IWE2 563 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 SUPT20HQ8NEM7 779 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 CAMKK2Q96RR4 588 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 AGPAT5Q9NUQ2 364 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 CAPN11Q9UMQ6 739 aa18.92■□□□□ 0.62
PHGDH-229ENST00000641891 LUC7L2Q9Y383 392 aaKnown RBP18.92■□□□□ 0.62
PHGDH-229ENST00000641891 POTEB3A0JP26 581 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 POTECB2RU33 542 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 BMP3P12645 472 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 ECE1P42892 770 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 ARHGAP4P98171 946 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 EHHADHQ08426 723 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 ARHGAP29Q52LW3 1261 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 POTEBQ6S5H4 581 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 OR8K1Q8NGG5 319 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 DNAJC19Q96DA6 116 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 DNAJC7Q99615 494 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 GTPBP4Q9BZE4 634 aaKnown RBP18.91■□□□□ 0.62
PHGDH-229ENST00000641891 TTYH3Q9C0H2 523 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 GLT8D2Q9H1C3 349 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.91■□□□□ 0.622e-7■■■■□ 19.6
PHGDH-229ENST00000641891 KIAA1024Q9UPX6 916 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 COL4A5P29400 1685 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 ARHGAP25P42331 645 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 USP11P51784 963 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 COASYQ13057 564 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 KIAA1755Q5JYT7 1200 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 ZNF569Q5MCW4 686 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 WDR59Q6PJI9 974 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 CRYGNQ8WXF5 182 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 FGFBP2Q9BYJ0 223 aa18.91■□□□□ 0.62
PHGDH-229ENST00000641891 REXO2Q9Y3B8 237 aaKnown RBP18.91■□□□□ 0.62
PHGDH-229ENST00000641891 CYP3A7-CYP3A51PA0A087WV96 503 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 NPHP3-ACAD11A0A0J9YXS1 232 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 SPDYE2BA6NHP3 402 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 OPLAHO14841 1288 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 KIF5CO60282 957 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 SPDYE6P0CI01 402 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 CYP3A7P24462 503 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 PRR16Q569H4 304 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 HYIQ5T013 277 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 GUF1Q8N442 669 aaKnown RBP18.9■□□□□ 0.62
PHGDH-229ENST00000641891 MBOAT7Q96N66 472 aa18.9■□□□□ 0.62
PHGDH-229ENST00000641891 NAP1L4Q99733 375 aaKnown RBP18.9■□□□□ 0.62
PHGDH-229ENST00000641891 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-229ENST00000641891 ZBTB12Q9Y330 459 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-229ENST00000641891 PSMD14O00487 310 aa18.89■□□□□ 0.62
PHGDH-229ENST00000641891 ERCC3P19447 782 aa18.89■□□□□ 0.62
PHGDH-229ENST00000641891 HOXA13P31271 388 aaPredicted RBP18.89■□□□□ 0.62
PHGDH-229ENST00000641891 CACNB1Q02641 598 aaPredicted RBP18.89■□□□□ 0.62
PHGDH-229ENST00000641891 PPP2R3AQ06190 1150 aa18.89■□□□□ 0.62
PHGDH-229ENST00000641891 AP3B2Q13367 1082 aa18.89■□□□□ 0.62
PHGDH-229ENST00000641891 RSBN1LQ6PCB5 846 aaPredicted RBP18.89■□□□□ 0.62
PHGDH-229ENST00000641891 ACER1Q8TDN7 264 aa18.89■□□□□ 0.62
PHGDH-229ENST00000641891 PCMTD1Q96MG8 357 aaPredicted RBP18.89■□□□□ 0.62
PHGDH-229ENST00000641891 ZNF277Q9NRM2 450 aaPredicted RBP18.89■□□□□ 0.62
PHGDH-229ENST00000641891 TBC1D7Q9P0N9 293 aa18.89■□□□□ 0.62
PHGDH-229ENST00000641891 PSME4Q14997 1843 aa18.89■□□□□ 0.61
PHGDH-229ENST00000641891 MED24O75448 989 aa18.89■□□□□ 0.61
PHGDH-229ENST00000641891 TRIM21P19474 475 aaKnown RBP18.89■□□□□ 0.61
PHGDH-229ENST00000641891 CDAN1Q8IWY9 1227 aa18.89■□□□□ 0.61
PHGDH-229ENST00000641891 SLC35F6Q8N357 371 aa18.89■□□□□ 0.61
PHGDH-229ENST00000641891 ETNPPLQ8TBG4 499 aa18.89■□□□□ 0.61
PHGDH-229ENST00000641891 UBXN4Q92575 508 aa18.89■□□□□ 0.61
PHGDH-229ENST00000641891 EPC1Q9H2F5 836 aa18.89■□□□□ 0.61
PHGDH-229ENST00000641891 TRIM10Q9UDY6 481 aa18.89■□□□□ 0.61
PHGDH-229ENST00000641891 KDM3AQ9Y4C1 1321 aa18.89■□□□□ 0.61
PHGDH-229ENST00000641891 COL2A1P02458 1487 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-229ENST00000641891 NDUFA10O95299 355 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 PLA2G4BP0C869 781 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 H2AFXP16104 143 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-229ENST00000641891 RAD51AP2Q09MP3 1159 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 LRRC27Q9C0I9 530 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 PANK4Q9NVE7 773 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 ZNF70Q9UC06 446 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-229ENST00000641891 PRR12Q9ULL5 1215 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 TFR2Q9UP52 801 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 EPN1Q9Y6I3 576 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-229ENST00000641891 POTEFA5A3E0 1075 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 FAM86B1E9PN63 330 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 FAM86B2P0C5J1 330 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 POTEIP0CG38 1075 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 POTEGQ6S5H5 508 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 POTEEQ6S8J3 1075 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms