RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 ALAS1P13196 640 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 CCT6AP40227 531 aaKnown RBP24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 ASIC1P78348 528 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 TRAF1Q13077 416 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 TMEM119Q4V9L6 283 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 ATG4CQ96DT6 458 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 SLC38A10Q9HBR0 1119 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 RMND1Q9NWS8 449 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 PPP2R3BQ9Y5P8 575 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 PRCPP42785 496 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 USP14P54578 494 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 UBASH3AP57075 661 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 SPIRE1Q08AE8 756 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 MUM1L1Q5H9M0 696 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 CLEC4DQ8WXI8 215 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 LARP4BQ92615 738 aaKnown RBP24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 HPS3Q969F9 1004 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 MAGEF1Q9HAY2 307 aa24.31■■□□□ 1.48
CHRNA7-228ENST00000637519 IGLV3-22A0A075B6J6 115 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 POTEB3A0JP26 581 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 MYMKA6NI61 221 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 POTECB2RU33 542 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 CIITAP33076 1130 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 POTEBQ6S5H4 581 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 RAD54LQ92698 747 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 AS3MTQ9HBK9 375 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 INTS13Q9NVM9 706 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 NCAPH2Q6IBW4 605 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 TMC6Q7Z403 805 aa24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 CACTINQ8WUQ7 758 aaKnown RBP24.3■■□□□ 1.48
CHRNA7-228ENST00000637519 PHIPQ8WWQ0 1821 aa24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 USP2O75604 605 aaPredicted RBP24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 CYP3A4P08684 503 aa24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 SUPT20HL1Q3ZLR7 823 aa24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 SV2BQ7L1I2 683 aa24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 DYMQ7RTS9 669 aa24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 SLFN12Q8IYM2 578 aa24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 CNKSR2Q8WXI2 1034 aa24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 C7orf25Q9BPX7 421 aa24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 STK17AQ9UEE5 414 aa24.29■■□□□ 1.48
CHRNA7-228ENST00000637519 PITPNM2Q9BZ72 1349 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 MED24O75448 989 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 CDK11BP21127 795 aaKnown RBP24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 KCNB1Q14721 858 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 SPATA1Q5VX52 437 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 NELFBQ8WX92 580 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 TRIM49BA6NDI0 452 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 E9PMD0 336 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 RHOBTB3O94955 611 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 MYL1P05976 194 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 FCER1AP12319 257 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 PDE4DQ08499 809 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 VGLL4Q14135 290 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 DCPSQ96C86 337 aaKnown RBP24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 KIAA1024Q9UPX6 916 aa24.28■■□□□ 1.48
CHRNA7-228ENST00000637519 HSD17B4P51659 736 aa24.27■■□□□ 1.48
CHRNA7-228ENST00000637519 PMS1P54277 932 aaKnown RBP24.27■■□□□ 1.48
CHRNA7-228ENST00000637519 PAK1Q13153 545 aa24.27■■□□□ 1.48
CHRNA7-228ENST00000637519 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.27■■□□□ 1.48
CHRNA7-228ENST00000637519 SULF1Q8IWU6 871 aa24.27■■□□□ 1.48
CHRNA7-228ENST00000637519 POTEFA5A3E0 1075 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 VWA5AO00534 786 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 ZNF500O60304 480 aaPredicted RBP24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 POTEIP0CG38 1075 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 POTEGQ6S5H5 508 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 POTEEQ6S8J3 1075 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 IL31RAQ8NI17 732 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 EXOC1Q9NV70 894 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 VAV3Q9UKW4 847 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 SNCAIPQ9Y6H5 919 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 SSBP05455 408 aaKnown RBP eCLIP24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 STK4Q13043 487 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 ADSSL1Q8N142 457 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 RIPK3Q9Y572 518 aa24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 CTDP1Q9Y5B0 961 aaPredicted RBP24.26■■□□□ 1.47
CHRNA7-228ENST00000637519 PARP14Q460N5 1801 aa24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 MEIS1O00470 390 aa24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 TBX3O15119 743 aa24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 TPM3P06753 285 aa24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 AMPD3Q01432 767 aa24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 KRT26Q7Z3Y9 468 aa24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 GIMAP8Q8ND71 665 aaPredicted RBP24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 PURBQ96QR8 312 aaKnown RBP24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 RWDD2AQ9UIY3 292 aa24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 CT47A1Q5JQC4 288 aaPredicted RBP24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 NOL9Q5SY16 702 aaKnown RBP24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 ILDR2Q71H61 639 aa24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 AFG3L2Q9Y4W6 797 aa24.25■■□□□ 1.47
CHRNA7-228ENST00000637519 EML1O00423 815 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 CHMP2AO43633 222 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 CYP4A11Q02928 519 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 HYIQ5T013 277 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 CDKAL1Q5VV42 579 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 MOB2Q70IA6 237 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 CATSPER3Q86XQ3 398 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 DDX12PQ92771 950 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 FAM20AQ96MK3 541 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 KDM3AQ9Y4C1 1321 aa24.24■■□□□ 1.47
CHRNA7-228ENST00000637519 ZBED4O75132 1171 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms