RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 FAM214AQ32MH5 1076 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 CDKAL1Q5VV42 579 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 IER5Q5VY09 327 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 KCNV1Q6PIU1 500 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 Q6YL49 198 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 PTF1AQ7RTS3 328 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 IRF2BP2Q7Z5L9 587 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 POLNQ7Z5Q5 900 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 NLRX1Q86UT6 975 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 PPARGC1BQ86YN6 1023 aaKnown RBP-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 FUKQ8N0W3 1084 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 SYNE4Q8N205 404 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 CCDC185Q8N715 623 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 SPRYD3Q8NCJ5 442 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 MAPK1IP1LQ8NDC0 245 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 CAGE1Q8TC20 777 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 HLA-CQ95604 372 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 ZBTB8AQ96BR9 441 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 REPS1Q96D71 796 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 MBD6Q96DN6 1003 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 ADAM2Q99965 735 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 ZPBPQ9BS86 351 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 DUSP26Q9BV47 211 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 SPRY4Q9C004 299 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 SPRTNQ9H040 489 aaPredicted RBP-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 ZBTB3Q9H5J0 574 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 MVB12BQ9H7P6 319 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 NRIP3Q9NQ35 241 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 CRTAC1Q9NQ79 661 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 ZDHHC3Q9NYG2 299 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 NKX1-2Q9UD57 310 aaPredicted RBP-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 GTF2IRD1Q9UHL9 959 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF223Q9UK11 482 aaPredicted RBP-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 COL4A3Q01955 1670 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 HMCN2Q8NDA2 5059 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 FRAS1Q86XX4 4008 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 RNF213Q63HN8 5207 aa-0.57□□□□□ -2.5
CDKL5-210ENST00000636046 PDZD2O15018 2839 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 FAM221AA4D161 298 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 FAM221BA6H8Z2 402 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 USP17L3A6NCW0 530 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 USP17L4A6NCW7 530 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 MANSC4A6NHS7 340 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 NUDT19A8MXV4 375 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 C6orf229H3BNL8 230 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 KIR2DS3K7RE56 304 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 ACOT8O14734 319 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 PROP1O75360 226 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 RAD17O75943 681 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 MAP3K6O95382 1288 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 TOP3BO95985 862 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 GHRHP01286 108 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 APOHP02749 345 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 FGF3P11487 239 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 KRT3P12035 628 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 ARSAP15289 507 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 IL4RP24394 825 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 RPL13P26373 211 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 CDC27P30260 824 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 NOS2P35228 1153 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 DRD3P35462 400 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 PLA2G5P39877 138 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 PXNP49023 591 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 CRIP2P52943 208 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 CACNA2D1P54289 1103 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 PROK1P58294 105 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 ERVFRD-1P60508 538 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SMAD4Q13485 552 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 KIR2DS3Q14952 304 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 RABEP1Q15276 862 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 KRTAP21-3Q3LHN1 58 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 PLEKHG4Q58EX7 1191 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 HABP4Q5JVS0 413 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 EXOSC6Q5RKV6 272 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 PXDC1Q5TGL8 231 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 METRNLQ641Q3 311 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF324BQ6AW86 544 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 RHOUQ7L0Q8 258 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 DHX32Q7L7V1 743 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 USP17L1Q7RTZ2 530 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 TMC7Q7Z402 723 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF584Q8IVC4 421 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SULF1Q8IWU6 871 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 KBTBD2Q8IY47 623 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 GPR135Q8IZ08 494 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF808Q8N4W9 903 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 LILRA3Q8N6C8 439 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 WDSUB1Q8N9V3 476 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 ARMC2Q8NEN0 867 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SLC9A6Q92581 669 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 DHX38Q92620 1227 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 DPF1Q92782 380 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 GLG1Q92896 1179 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 RFT1Q96AA3 541 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 RBMXL1Q96E39 390 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SCMH1Q96GD3 660 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 CEP63Q96MT8 703 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 LRRC37BQ96QE4 947 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SDHCQ99643 169 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SMR3AQ99954 134 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms