RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 LDHDQ86WU2 507 aa20.1■□□□□ 0.81
CLN5-206ENST00000635915 SLC39A2Q9NP94 309 aa20.1■□□□□ 0.81
CLN5-206ENST00000635915 KIAA1024Q9UPX6 916 aa20.1■□□□□ 0.81
CLN5-206ENST00000635915 PIK3CDO00329 1044 aa20.1■□□□□ 0.81
CLN5-206ENST00000635915 ADKP55263 362 aaKnown RBP20.1■□□□□ 0.81
CLN5-206ENST00000635915 FAM160B2Q86V87 743 aa20.1■□□□□ 0.81
CLN5-206ENST00000635915 IRF2BP1Q8IU81 584 aa20.1■□□□□ 0.81
CLN5-206ENST00000635915 KIAA0895Q8NCT3 520 aa20.1■□□□□ 0.81
CLN5-206ENST00000635915 VPS16Q9H269 839 aa20.1■□□□□ 0.81
CLN5-206ENST00000635915 TAB2Q9NYJ8 693 aa20.1■□□□□ 0.81
CLN5-206ENST00000635915 E9PMD0 336 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 PSMA7O14818 248 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 SSBP05455 408 aaKnown RBP eCLIP20.09■□□□□ 0.81
CLN5-206ENST00000635915 IDEP14735 1019 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 SPIRE1Q08AE8 756 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 MOXD1Q6UVY6 613 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 ARHGAP27Q6ZUM4 889 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 DDX12PQ92771 950 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 KCNJ18B7U540 433 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 ZNF76P36508 570 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 KCNJ12Q14500 433 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 Q4G0T1 1027 aa20.09■□□□□ 0.81
CLN5-206ENST00000635915 GCOM1H8Y6P7 765 aaPredicted RBP20.08■□□□□ 0.81
CLN5-206ENST00000635915 MSH4O15457 936 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 CTNND1O60716 968 aaKnown RBP20.08■□□□□ 0.81
CLN5-206ENST00000635915 MED24O75448 989 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 POLR2MP0CAP2 368 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 STIM1Q13586 685 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 MTMR2Q13614 643 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 TCP11X2Q5H9J9 407 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 MCTP2Q6DN12 878 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 NCAPH2Q6IBW4 605 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 SLFN12Q8IYM2 578 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 ZKSCAN4Q969J2 545 aaPredicted RBP20.08■□□□□ 0.81
CLN5-206ENST00000635915 CCDC47Q96A33 483 aaKnown RBP20.08■□□□□ 0.81
CLN5-206ENST00000635915 TRIM47Q96LD4 638 aa20.08■□□□□ 0.81
CLN5-206ENST00000635915 POTEFA5A3E0 1075 aa20.08■□□□□ 0.8
CLN5-206ENST00000635915 PLA2G6O60733 806 aa20.08■□□□□ 0.8
CLN5-206ENST00000635915 POTEIP0CG38 1075 aa20.08■□□□□ 0.8
CLN5-206ENST00000635915 E4F1Q66K89 784 aaPredicted RBP20.08■□□□□ 0.8
CLN5-206ENST00000635915 TTI2Q6NXR4 508 aa20.08■□□□□ 0.8
CLN5-206ENST00000635915 POTEGQ6S5H5 508 aa20.08■□□□□ 0.8
CLN5-206ENST00000635915 POTEEQ6S8J3 1075 aa20.08■□□□□ 0.8
CLN5-206ENST00000635915 SRRTQ9BXP5 876 aaKnown RBP20.08■□□□□ 0.8
CLN5-206ENST00000635915 H7C1D1 291 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 CEP135Q66GS9 1140 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 CPXCR1Q8N123 301 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 CCAR2Q8N163 923 aaKnown RBP20.07■□□□□ 0.8
CLN5-206ENST00000635915 GLIS3Q8NEA6 775 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 TANGO6Q9C0B7 1094 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 LIMA1Q9UHB6 759 aaKnown RBP20.07■□□□□ 0.8
CLN5-206ENST00000635915 ZNF536O15090 1300 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 N4BP3O15049 544 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 CIITAP33076 1130 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 RAD51AP2Q09MP3 1159 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 ANKRD40Q6AI12 368 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 TC2NQ8N9U0 490 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 CTAGE1Q96RT6 745 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 DUSP9Q99956 384 aaKnown RBP20.07■□□□□ 0.8
CLN5-206ENST00000635915 WDR18Q9BV38 432 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 KIAA1683Q9H0B3 1180 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 CCPG1Q9ULG6 757 aa20.07■□□□□ 0.8
CLN5-206ENST00000635915 MRPL11Q9Y3B7 192 aaKnown RBP20.07■□□□□ 0.8
CLN5-206ENST00000635915 UNC13DQ70J99 1090 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 CPLX3Q8WVH0 158 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 IGLV3-22A0A075B6J6 115 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 NPHP3-ACAD11A0A0J9YXS1 232 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 MEIS1O00470 390 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 PBX1P40424 430 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 EPS15P42566 896 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 COPB1P53618 953 aaKnown RBP20.06■□□□□ 0.8
CLN5-206ENST00000635915 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
CLN5-206ENST00000635915 SPP2Q13103 211 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 HYIQ5T013 277 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 CNNM4Q6P4Q7 775 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 P2RX5Q93086 422 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 SLF1Q9BQI6 1058 aa20.06■□□□□ 0.8
CLN5-206ENST00000635915 KDM3AQ9Y4C1 1321 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 NFIBO00712 420 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 CYP3A4P08684 503 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 TRAF1Q13077 416 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 FILIP1LQ4L180 1135 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 CATSPER3Q86XQ3 398 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 TMEM139Q8IV31 216 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 DNAJC19Q96DA6 116 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 HOOK2Q96ED9 719 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 DHTKD1Q96HY7 919 aaPredicted RBP20.05■□□□□ 0.8
CLN5-206ENST00000635915 WRNIP1Q96S55 665 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 TMX1Q9H3N1 280 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 HOMER2Q9NSB8 354 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 EMILIN3Q9NT22 766 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 GGA3Q9NZ52 723 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 LRRC10BA6NIK2 292 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 WDR46O15213 610 aaKnown RBP20.05■□□□□ 0.8
CLN5-206ENST00000635915 VCAM1P19320 739 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 PSMC6P62333 389 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 CYP4A11Q02928 519 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 LRRC41Q15345 812 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 CSGALNACT2Q8N6G5 542 aa20.05■□□□□ 0.8
CLN5-206ENST00000635915 PRPF38AQ8NAV1 312 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms