RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 GRIN2DO15399 1336 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 CDH23Q9H251 3354 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 CD4P01730 458 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 FOSL2P15408 326 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 DNAJB2P25686 324 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 RPS6P62753 249 aaKnown RBP17.06■□□□□ 0.32
HSPG2-214ENST00000635682 PDE4DQ08499 809 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 APOBRQ0VD83 1088 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 GRIN2CQ14957 1233 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 ZNF365Q70YC5 407 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 SLC43A3Q8NBI5 491 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 COL25A1Q9BXS0 654 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-214ENST00000635682 ZSWIM6Q9HCJ5 1215 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 VTA1Q9NP79 307 aa17.06■□□□□ 0.32
HSPG2-214ENST00000635682 UMODL1Q5DID0 1318 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 LOC102724159A0A0B4J2E5 919 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 ZEB2O60315 1214 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 CABYRO75952 493 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 PLEKHA8P1O95397 391 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 ALDH5A1P51649 535 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-214ENST00000635682 PWP2Q15269 919 aaKnown RBP17.05■□□□□ 0.32
HSPG2-214ENST00000635682 ANKRD1Q15327 319 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 CPLX2Q6PUV4 134 aaKnown RBP17.05■□□□□ 0.32
HSPG2-214ENST00000635682 SLC30A10Q6XR72 485 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 TMTC3Q6ZXV5 915 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 SAMD3Q8N6K7 520 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 DNERQ8NFT8 737 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 MORC4Q8TE76 937 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 UPF3BQ9BZI7 483 aaKnown RBP17.05■□□□□ 0.32
HSPG2-214ENST00000635682 TRPV6Q9H1D0 765 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 MAP3K20Q9NYL2 800 aaKnown RBP17.05■□□□□ 0.32
HSPG2-214ENST00000635682 GTF3C3Q9Y5Q9 886 aa17.05■□□□□ 0.32
HSPG2-214ENST00000635682 GCOM1H8Y6P7 765 aaPredicted RBP17.04■□□□□ 0.32
HSPG2-214ENST00000635682 CPLX1O14810 134 aa17.04■□□□□ 0.32
HSPG2-214ENST00000635682 POLR2MP0CAP2 368 aa17.04■□□□□ 0.32
HSPG2-214ENST00000635682 PBX2P40425 430 aa17.04■□□□□ 0.32
HSPG2-214ENST00000635682 ARHGEF16Q5VV41 709 aa17.04■□□□□ 0.32
HSPG2-214ENST00000635682 MTMR8Q96EF0 704 aa17.04■□□□□ 0.32
HSPG2-214ENST00000635682 WDR11Q9BZH6 1224 aa17.04■□□□□ 0.32
HSPG2-214ENST00000635682 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
HSPG2-214ENST00000635682 Q9Y3F1 56 aa17.04■□□□□ 0.32
HSPG2-214ENST00000635682 CYTH3O43739 400 aa17.03■□□□□ 0.32
HSPG2-214ENST00000635682 CCL23P55773 120 aa17.03■□□□□ 0.32
HSPG2-214ENST00000635682 DUSP28Q4G0W2 176 aa17.03■□□□□ 0.32
HSPG2-214ENST00000635682 HEATR3Q7Z4Q2 680 aa17.03■□□□□ 0.32
HSPG2-214ENST00000635682 CMTR1Q8N1G2 835 aaKnown RBP17.03■□□□□ 0.32
HSPG2-214ENST00000635682 SRBD1Q8N5C6 995 aaKnown RBP17.03■□□□□ 0.32
HSPG2-214ENST00000635682 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
HSPG2-214ENST00000635682 NSUN6Q8TEA1 469 aaKnown RBP17.03■□□□□ 0.32
HSPG2-214ENST00000635682 TIFAQ96CG3 184 aa17.03■□□□□ 0.32
HSPG2-214ENST00000635682 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
HSPG2-214ENST00000635682 ZNF576Q9H609 170 aa17.03■□□□□ 0.32
HSPG2-214ENST00000635682 IL23AQ9NPF7 189 aa17.03■□□□□ 0.32
HSPG2-214ENST00000635682 MYH6P13533 1939 aa17.02■□□□□ 0.32
HSPG2-214ENST00000635682 TMEM265A0A087WTH1 108 aa17.02■□□□□ 0.32
HSPG2-214ENST00000635682 B4GALT4O60513 344 aa17.02■□□□□ 0.32
HSPG2-214ENST00000635682 COL9A3Q14050 684 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-214ENST00000635682 RASIP1Q5U651 963 aa17.02■□□□□ 0.32
HSPG2-214ENST00000635682 FBXL16Q8N461 479 aa17.02■□□□□ 0.32
HSPG2-214ENST00000635682 PPP1R13LQ8WUF5 828 aa17.02■□□□□ 0.32
HSPG2-214ENST00000635682 RMDN3Q96TC7 470 aa17.02■□□□□ 0.32
HSPG2-214ENST00000635682 PBX4Q9BYU1 374 aa17.02■□□□□ 0.32
HSPG2-214ENST00000635682 CXXC1Q9P0U4 656 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-214ENST00000635682 hCG_1984214I3L0E3 225 aa17.01■□□□□ 0.31
HSPG2-214ENST00000635682 FGBP02675 491 aa17.01■□□□□ 0.31
HSPG2-214ENST00000635682 MYL3P08590 195 aa17.01■□□□□ 0.31
HSPG2-214ENST00000635682 PSRC1Q6PGN9 363 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-214ENST00000635682 TRIM22Q8IYM9 498 aa17.01■□□□□ 0.31
HSPG2-214ENST00000635682 ZNF713Q8N859 430 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-214ENST00000635682 SYTL5Q8TDW5 730 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-214ENST00000635682 NOC4LQ9BVI4 516 aaKnown RBP17.01■□□□□ 0.31
HSPG2-214ENST00000635682 EHMT1Q9H9B1 1298 aa17.01■□□□□ 0.31
HSPG2-214ENST00000635682 RBM47A0AV96 593 aaKnown RBP17■□□□□ 0.31
HSPG2-214ENST00000635682 PPP1R11O60927 126 aaPredicted RBP17■□□□□ 0.31
HSPG2-214ENST00000635682 NAPAP54920 295 aa17■□□□□ 0.31
HSPG2-214ENST00000635682 OTOP2Q7RTS6 562 aa17■□□□□ 0.31
HSPG2-214ENST00000635682 FCHSD1Q86WN1 690 aa17■□□□□ 0.31
HSPG2-214ENST00000635682 OR6J1Q8NGC5 347 aa17■□□□□ 0.31
HSPG2-214ENST00000635682 CCDC12Q8WUD4 166 aaPredicted RBP17■□□□□ 0.31
HSPG2-214ENST00000635682 HERVK_113Q902F9 699 aa17■□□□□ 0.31
HSPG2-214ENST00000635682 TBC1D5Q92609 795 aa17■□□□□ 0.31
HSPG2-214ENST00000635682 COPS5Q92905 334 aa17■□□□□ 0.31
HSPG2-214ENST00000635682 SCLYQ96I15 445 aa17■□□□□ 0.31
HSPG2-214ENST00000635682 IWS1Q96ST2 819 aa17■□□□□ 0.31
HSPG2-214ENST00000635682 ALDH8A1Q9H2A2 487 aaPredicted RBP17■□□□□ 0.31
HSPG2-214ENST00000635682 TRMT13Q9NUP7 481 aaKnown RBP17■□□□□ 0.31
HSPG2-214ENST00000635682 V9GY48 417 aaPredicted RBP17■□□□□ 0.31
HSPG2-214ENST00000635682 hCG_1642624A0A1W2PR95 340 aa16.99■□□□□ 0.31
HSPG2-214ENST00000635682 CDKL5O76039 1030 aa16.99■□□□□ 0.31
HSPG2-214ENST00000635682 CYP2C9P11712 490 aa16.99■□□□□ 0.31
HSPG2-214ENST00000635682 EIF2AK2P19525 551 aaKnown RBP16.99■□□□□ 0.31
HSPG2-214ENST00000635682 HOXA13P31271 388 aaPredicted RBP16.99■□□□□ 0.31
HSPG2-214ENST00000635682 CCT2P78371 535 aaKnown RBP16.99■□□□□ 0.31
HSPG2-214ENST00000635682 STK3Q13188 491 aa16.99■□□□□ 0.31
HSPG2-214ENST00000635682 STXBP2Q15833 593 aa16.99■□□□□ 0.31
HSPG2-214ENST00000635682 C8orf34Q49A92 452 aa16.99■□□□□ 0.31
HSPG2-214ENST00000635682 USP38Q8NB14 1042 aa16.99■□□□□ 0.31
HSPG2-214ENST00000635682 ZNF274Q96GC6 653 aaPredicted RBP16.99■□□□□ 0.31
HSPG2-214ENST00000635682 AGXT2Q9BYV1 514 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms