RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 TMEM177Q53S58 311 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 CT47A1Q5JQC4 288 aaPredicted RBP3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 HABP4Q5JVS0 413 aaKnown RBP3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 HLA-DQA1Q5Y7H0 255 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 OVCH1Q7RTY7 1134 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 NXPE1Q8N323 547 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 ANKS4BQ8N8V4 417 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 SHISA4Q96DD7 197 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 KCNJ15Q99712 375 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 ORAI3Q9BRQ5 295 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 ALG1Q9BT22 464 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 JAM3Q9BX67 310 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 TMX1Q9H3N1 280 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 C19orf44Q9H6X5 657 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 SMURF1Q9HCE7 757 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 CRTAC1Q9NQ79 661 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 MBNL3Q9NUK0 354 aaKnown RBP3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 KLHL42Q9P2K6 505 aa3.9□□□□□ -1.79
SCARNA4-202ENST00000625402 A0A1W2PQ45 241 aaPredicted RBP3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 A0A1W2PQY0 241 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 WTIPA6NIX2 430 aaPredicted RBP3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 C22orf46C9J442 243 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 ZNF561-AS1K7EIQ3 104 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 KCNK3O14649 394 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 MYO1BO43795 1136 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 NRDCO43847 1150 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 FUCA1P04066 466 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 AMY2AP04746 511 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 RNASE1P07998 156 aaKnown RBP3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 BPIP17213 487 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 AMY2BP19961 511 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 CDK11BP21127 795 aaKnown RBP3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 ADCYAP1R1P41586 468 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 DNM2P50570 870 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 CORO7P57737 925 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 RTP1P59025 263 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 LSAMPQ13449 338 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 DHCR24Q15392 516 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 SLC23A3Q6PIS1 610 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 CEP68Q76N32 757 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 DDX53Q86TM3 631 aaKnown RBP3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 CHST14Q8NCH0 376 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 PDZD8Q8NEN9 1154 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 SH3RF2Q8TEC5 729 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 CHAMP1Q96JM3 812 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 DDX56Q9NY93 547 aaKnown RBP3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 H2AFY2Q9P0M6 372 aaPredicted RBP3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 TAF6LQ9Y6J9 622 aa3.89□□□□□ -1.79
SCARNA4-202ENST00000625402 B4E1Z4 1266 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 FAM47E-STBD1D6RA91 191 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 NEMP1O14524 444 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 NKRFO15226 690 aaKnown RBP eCLIP3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 HPXP02790 462 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 COL6A2P12110 1019 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 PDE6AP16499 860 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 NAT1P18440 290 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 IBSPP21815 317 aaPredicted RBP3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 FAM50AQ14320 339 aaKnown RBP3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 STAT4Q14765 748 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 PLCL1Q15111 1095 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 ZNF792Q3KQV3 632 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 PLEKHG6Q3KR16 790 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 NLRX1Q86UT6 975 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 NOSTRINQ8IVI9 506 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 NUP43Q8NFH3 380 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 PIP4K2CQ8TBX8 421 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 FBXW5Q969U6 566 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 ASIC4Q96FT7 647 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 TMEM169Q96HH4 297 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 WNK4Q96J92 1243 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 TRIM8Q9BZR9 551 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 ACSL6Q9UKU0 697 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 ANGEL1Q9UNK9 670 aaKnown RBP3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 X6R8D5 127 aa3.88□□□□□ -1.79
SCARNA4-202ENST00000625402 FITM1A5D6W6 292 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 H7BY64 318 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 MAN2B1O00754 1011 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 NPTXRO95502 500 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 F2P00734 622 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 NTRK1P04629 796 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 GLI4P10075 376 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 ATP2A2P16615 1042 aaKnown RBP3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 PRKCAP17252 672 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 FLT3P36888 993 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 GDNFP39905 211 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 GTF2A2P52657 109 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 JAM2P57087 298 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 NR0B2Q15466 257 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 BRDTQ58F21 947 aaPredicted RBP3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 WWC2Q6AWC2 1192 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 UBE2R2Q712K3 238 aaPredicted RBP3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 DDX46Q7L014 1031 aaKnown RBP3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 C16orf59Q7L2K0 433 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 ANKLE2Q86XL3 938 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 PTRH1Q86Y79 214 aaKnown RBP3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 RBM12BQ8IXT5 1001 aaKnown RBP3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 ABI1Q8IZP0 508 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 AHI1Q8N157 1196 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 LZTR1Q8N653 840 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 SMC1BQ8NDV3 1235 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms