RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 CCDC155Q8N6L0 562 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 ANP32DO95626 131 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 ASIC1P78348 528 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 KCNB1Q14721 858 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 MIIPQ5JXC2 388 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 CATIPQ7Z7H3 387 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 ZNF483Q8TF39 744 aaPredicted RBP16.7■□□□□ 0.26
PMS1-221ENST00000624204 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
PMS1-221ENST00000624204 PCCAP05165 728 aaPredicted RBP16.7■□□□□ 0.26
PMS1-221ENST00000624204 HSPA9P38646 679 aaKnown RBP16.7■□□□□ 0.26
PMS1-221ENST00000624204 MAP2K1Q02750 393 aaPredicted RBP16.7■□□□□ 0.26
PMS1-221ENST00000624204 IFIT1BQ5T764 474 aaKnown RBP16.7■□□□□ 0.26
PMS1-221ENST00000624204 TATDN2Q93075 761 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 HOOK2Q96ED9 719 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 FAM167BQ9BTA0 163 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 PLCB1Q9NQ66 1216 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 TRIM37O94972 964 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 FCER1AP12319 257 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 VEGFAP15692 232 aaPredicted RBP16.7■□□□□ 0.26
PMS1-221ENST00000624204 ERVK-9P63128 1117 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 BYSLQ13895 437 aaKnown RBP16.7■□□□□ 0.26
PMS1-221ENST00000624204 ALX1Q15699 326 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 AP1ARQ63HQ0 302 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 CCT6BQ92526 530 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 TAF4BQ92750 862 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 LRRC45Q96CN5 670 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 LBHD1Q9BQE6 289 aaPredicted RBP16.7■□□□□ 0.26
PMS1-221ENST00000624204 FBXL5Q9UKA1 691 aa16.7■□□□□ 0.26
PMS1-221ENST00000624204 CCNE1P24864 410 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 SLC8A3P57103 927 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 CDK17Q00537 523 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 STK4Q13043 487 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 CCDC197Q8NCU1 140 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 GIMAP8Q8ND71 665 aaPredicted RBP16.69■□□□□ 0.26
PMS1-221ENST00000624204 CCDC47Q96A33 483 aaKnown RBP16.69■□□□□ 0.26
PMS1-221ENST00000624204 ZBTB10Q96DT7 871 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 SPAG5Q96R06 1193 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 SELENOSQ9BQE4 189 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 TSKSQ9UJT2 592 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 SPEF2Q9C093 1822 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 TCRBV5S4A2TA0A5A2 114 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 BICDL2A1A5D9 508 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 KCNK3O14649 394 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 ADAMTS3O15072 1205 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 IFNAR2P48551 515 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 NAALADL2Q58DX5 795 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 RCSD1Q6JBY9 416 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 ANKS4BQ8N8V4 417 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 ERGIC2Q96RQ1 377 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 AP1M1Q9BXS5 423 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 ARHGAP23Q9P227 1491 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 SPATA31A3Q5VYP0 1347 aa16.69■□□□□ 0.26
PMS1-221ENST00000624204 ITGA6P23229 1130 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 UAP1Q16222 522 aaPredicted RBP16.68■□□□□ 0.26
PMS1-221ENST00000624204 DTHD1Q6ZMT9 781 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 DDX17Q92841 729 aaKnown RBP16.68■□□□□ 0.26
PMS1-221ENST00000624204 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
PMS1-221ENST00000624204 STK38LQ9Y2H1 464 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 MARF1Q9Y4F3 1742 aaKnown RBP16.68■□□□□ 0.26
PMS1-221ENST00000624204 PRPF3O43395 683 aaKnown RBP16.68■□□□□ 0.26
PMS1-221ENST00000624204 CAPRIN2Q6IMN6 1127 aaKnown RBP16.68■□□□□ 0.26
PMS1-221ENST00000624204 TTLL11Q8NHH1 800 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 ESR2Q92731 530 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 SAAL1Q96ER3 474 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 DHTKD1Q96HY7 919 aaPredicted RBP16.68■□□□□ 0.26
PMS1-221ENST00000624204 YIPF3Q9GZM5 350 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 RBM28Q9NW13 759 aaKnown RBP16.68■□□□□ 0.26
PMS1-221ENST00000624204 RNF14Q9UBS8 474 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 KLRC4O43908 158 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 DIAPH2O60879 1101 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 LONP1P36776 959 aaKnown RBP16.68■□□□□ 0.26
PMS1-221ENST00000624204 BIRC3Q13489 604 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 PARD3BQ8TEW8 1205 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 NDST4Q9H3R1 872 aa16.68■□□□□ 0.26
PMS1-221ENST00000624204 A0A1W2PQJ5 194 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 CCT8L1PA6NM43 557 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 SRRM3A6NNA2 597 aaPredicted RBP16.67■□□□□ 0.26
PMS1-221ENST00000624204 CEP104O60308 925 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 DNAJC8O75937 253 aaPredicted RBP16.67■□□□□ 0.26
PMS1-221ENST00000624204 RHOBTB3O94955 611 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
PMS1-221ENST00000624204 BZW1Q7L1Q6 419 aaKnown RBP16.67■□□□□ 0.26
PMS1-221ENST00000624204 GPKOWQ92917 476 aaPredicted RBP eCLIP16.67■□□□□ 0.26
PMS1-221ENST00000624204 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 DPH5Q9H2P9 285 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 GREM2Q9H772 168 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 TRPC6Q9Y210 931 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 C15orf41Q9Y2V0 281 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 NFAT5O94916 1531 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 FLT3P36888 993 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 GRIK3Q13003 919 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 NPY5RQ15761 445 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 LACTB2Q53H82 288 aaPredicted RBP16.67■□□□□ 0.26
PMS1-221ENST00000624204 ENAHQ8N8S7 591 aaPredicted RBP16.67■□□□□ 0.26
PMS1-221ENST00000624204 CHMP6Q96FZ7 201 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 DCAF5Q96JK2 942 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 SLC39A2Q9NP94 309 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 RTL9Q8NET4 1388 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 KLRC1P26715 233 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms