RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 SUGCTQ9HAC7 445 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 ESYT2A0FGR8 921 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 SPDYE5A6NIY4 337 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 MTIF2P46199 727 aaKnown RBP13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 IGBP1P78318 339 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 CATSPERGQ6ZRH7 1159 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 NOD1Q9Y239 953 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 MYCT1Q8N699 235 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 CCDC88AQ3V6T2 1871 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 PRKCSHP14314 528 aaPredicted RBP13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 CHST13Q8NET6 341 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 AK8Q96MA6 479 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 AGTPBP1Q9UPW5 1226 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 AKAP11Q9UKA4 1901 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 COL24A1Q17RW2 1714 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 PEX10O60683 326 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 COPB2P35606 906 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 FKBP1BP68106 108 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 OTUD6AQ7L8S5 288 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 METTL13Q8N6R0 699 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 PROCA1Q8NCQ7 364 aaPredicted RBP13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 IGKV6D-41A0A0C4DH26 115 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 MANSC4A6NHS7 340 aaPredicted RBP13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 OFD1O75665 1012 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 DEFB115Q30KQ5 88 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 TKFCQ3LXA3 575 aa13.97□□□□□ -0.17
SCAMP1-207ENST00000621999 WNK4Q96J92 1243 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 PLCG1P19174 1290 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 LONRF3Q496Y0 759 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 EARS2Q5JPH6 523 aaKnown RBP13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 TMEM60Q9H2L4 133 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 MMRN2Q9H8L6 949 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 EFCC1Q9HA90 598 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 LRP5O75197 1615 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 MARK3P27448 753 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 SETQ01105 290 aaPredicted RBP13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 MUM1L1Q5H9M0 696 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 PIGOQ8TEQ8 1089 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.17
SCAMP1-207ENST00000621999 GCLCP48506 637 aaPredicted RBP13.96□□□□□ -0.18
SCAMP1-207ENST00000621999 FAM200AQ8TCP9 573 aa13.96□□□□□ -0.18
SCAMP1-207ENST00000621999 FAM20AQ96MK3 541 aa13.96□□□□□ -0.18
SCAMP1-207ENST00000621999 AP5M1Q9H0R1 490 aa13.96□□□□□ -0.18
SCAMP1-207ENST00000621999 POLD4Q9HCU8 107 aa13.96□□□□□ -0.18
SCAMP1-207ENST00000621999 KIAA1468Q9P260 1216 aa13.96□□□□□ -0.18
SCAMP1-207ENST00000621999 SEPT9Q9UHD8 586 aaPredicted RBP13.96□□□□□ -0.18
SCAMP1-207ENST00000621999 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.18
SCAMP1-207ENST00000621999 PHF20L1A8MW92 1017 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 ATP2C1P98194 919 aaPredicted RBP13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 MCM6Q14566 821 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 PDXDC2PQ6P474 469 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 LUZP1Q86V48 1076 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 AFG3L2Q9Y4W6 797 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 PCDHA5Q9Y5H7 936 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 TMEM88BA6NKF7 163 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 USO1O60763 962 aaKnown RBP13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 FGFR1OPO95684 399 aaKnown RBP13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 FAM102BQ5T8I3 360 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 NELFCDQ8IXH7 590 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 FAM177A1Q8N128 213 aaPredicted RBP13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 ATP6V0A1Q93050 837 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 TRPA1O75762 1119 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 CYP4F22Q6NT55 531 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
SCAMP1-207ENST00000621999 HARSP12081 509 aaKnown RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 FUT2Q10981 343 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 HS2ST1Q7LGA3 356 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 GTF3C2Q8WUA4 911 aaPredicted RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 IFT74Q96LB3 600 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 MRPL44Q9H9J2 332 aaKnown RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 IPO7O95373 1038 aaKnown RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 SNHG28P0DPA3 235 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 USP49Q70CQ1 688 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 PPFIBP1Q86W92 1011 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 ZBED3Q96IU2 234 aaPredicted RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 SNED1Q8TER0 1413 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 ZBTB22O15209 634 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 CBFA2T2O43439 604 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 SMTNP53814 917 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 MIS18BP1Q6P0N0 1132 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 CNNM4Q6P4Q7 775 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 SIAH1Q8IUQ4 282 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 SYTL5Q8TDW5 730 aaPredicted RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 BHMT2Q9H2M3 363 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 RANBP17Q9H2T7 1088 aaKnown RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 PFASO15067 1338 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 ASB14A6NK59 587 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 TXNP10599 105 aaKnown RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 CASP1P29466 404 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 TOB1P50616 345 aaPredicted RBP13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 KIAA1755Q5JYT7 1200 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 CEP170P1Q96L14 293 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 TBC1D22BQ9NU19 505 aa13.94□□□□□ -0.18
SCAMP1-207ENST00000621999 GCNT3O95395 438 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms