RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 A0A1W2PQ27 194 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 A0A1W2PQ64 194 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 A0A1W2PQD8 194 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 CCDC66A2RUB6 948 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 SFI1A8K8P3 1242 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 K7ERI5 159 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 PSAPP07602 524 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 ZSCAN20P17040 1043 aaPredicted RBP10.15□□□□□ -0.78
GGA3-223ENST00000621870 PLCG1P19174 1290 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 ERCC5P28715 1186 aaPredicted RBP10.15□□□□□ -0.78
GGA3-223ENST00000621870 POLR2FP61218 127 aaKnown RBP10.15□□□□□ -0.78
GGA3-223ENST00000621870 YWHAEP62258 255 aaKnown RBP10.15□□□□□ -0.78
GGA3-223ENST00000621870 MTMR2Q13614 643 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 ALX1Q15699 326 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 CDC42EP5Q6NZY7 148 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 SCYL2Q6P3W7 929 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 GSDMAQ96QA5 445 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 FEM1BQ9UK73 627 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 LRFN2Q9ULH4 789 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 DLC1Q96QB1 1528 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 MST1RQ04912 1400 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 HSF2BPO75031 334 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 ZNF157P51786 506 aaPredicted RBP10.15□□□□□ -0.78
GGA3-223ENST00000621870 ARHGAP4P98171 946 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 TRIML1Q8N9V2 468 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 CCDC63Q8NA47 563 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 DDX12PQ92771 950 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 ZNF668Q96K58 619 aaPredicted RBP10.15□□□□□ -0.78
GGA3-223ENST00000621870 RPAP3Q9H6T3 665 aaPredicted RBP10.15□□□□□ -0.78
GGA3-223ENST00000621870 ZNF70Q9UC06 446 aaPredicted RBP10.15□□□□□ -0.78
GGA3-223ENST00000621870 RCOR1Q9UKL0 485 aa10.15□□□□□ -0.78
GGA3-223ENST00000621870 SHTN1A0MZ66 631 aa10.15□□□□□ -0.79
GGA3-223ENST00000621870 POTEMA6NI47 508 aa10.15□□□□□ -0.79
GGA3-223ENST00000621870 SLFN14P0C7P3 912 aa10.15□□□□□ -0.79
GGA3-223ENST00000621870 TTBK2Q6IQ55 1244 aa10.15□□□□□ -0.79
GGA3-223ENST00000621870 FAM149B1Q96BN6 582 aa10.15□□□□□ -0.79
GGA3-223ENST00000621870 IFIH1Q9BYX4 1025 aaKnown RBP10.15□□□□□ -0.79
GGA3-223ENST00000621870 DISC1Q9NRI5 854 aa10.15□□□□□ -0.79
GGA3-223ENST00000621870 CGNQ9P2M7 1197 aaKnown RBP10.15□□□□□ -0.79
GGA3-223ENST00000621870 NXF1Q9UBU9 619 aaKnown RBP10.15□□□□□ -0.79
GGA3-223ENST00000621870 ARHGAP6O43182 974 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 ZEB2O60315 1214 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 PPP6R2O75170 966 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 PLA2G4BP0C869 781 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 KLRK1P26718 216 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 NT5C2P49902 561 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 ZNF445P59923 1031 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 CBX1P83916 185 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 TOB2Q14106 344 aaPredicted RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 EXOC3L4Q17RC7 722 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 SPATA1Q5VX52 437 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 PPP1R21Q6ZMI0 780 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 CATSPER4Q7RTX7 472 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 ZBTB33Q86T24 672 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 EXOC8Q8IYI6 725 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 STAG2Q8N3U4 1231 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 C7orf31Q8N865 590 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 FLT1P17948 1338 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 TLR3O15455 904 aaKnown RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 XPOTO43592 962 aaKnown RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 ATF7P17544 494 aaPredicted RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 FKBP3Q00688 224 aaKnown RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 STYK1Q6J9G0 422 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 PEX26Q7Z412 305 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 CCDC125Q86Z20 511 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 MB21D2Q8IYB1 491 aaPredicted RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 THNSL1Q8IYQ7 743 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 C17orf53Q8N3J3 647 aaPredicted RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 ANKRD13CQ8N6S4 541 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 TSGA10Q9BZW7 698 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 CUEDC2Q9H467 287 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 LY9Q9HBG7 655 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 PARVGQ9HBI0 331 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 MTRF1LQ9UGC7 380 aaKnown RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 CEMIPQ8WUJ3 1361 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 SYNJ2BP-COX16A0A087WUM0 186 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 IFNB1P01574 187 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 FCER1AP12319 257 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 CDC27P30260 824 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 PEX3P56589 373 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 RSRC2Q7L4I2 434 aaKnown RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 FBXO33Q7Z6M2 555 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 FAM186BQ8IYM0 893 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 UBL4BQ8N7F7 174 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 SECISBP2LQ93073 1101 aaKnown RBP10.14□□□□□ -0.79
GGA3-223ENST00000621870 PRIMPOLQ96LW4 560 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 PRDM10Q9NQV6 1147 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 TMEM260Q9NX78 707 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 COX16Q9P0S2 106 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 STK17AQ9UEE5 414 aa10.14□□□□□ -0.79
GGA3-223ENST00000621870 NDUFB10O96000 172 aa10.13□□□□□ -0.79
GGA3-223ENST00000621870 MYL3P08590 195 aa10.13□□□□□ -0.79
GGA3-223ENST00000621870 AP3B2Q13367 1082 aa10.13□□□□□ -0.79
GGA3-223ENST00000621870 PFKFB3Q16875 520 aaPredicted RBP10.13□□□□□ -0.79
GGA3-223ENST00000621870 C9orf131Q5VYM1 1079 aa10.13□□□□□ -0.79
GGA3-223ENST00000621870 FASTKD5Q7L8L6 764 aaKnown RBP10.13□□□□□ -0.79
GGA3-223ENST00000621870 LDHDQ86WU2 507 aa10.13□□□□□ -0.79
GGA3-223ENST00000621870 ADGRF4Q8IZF3 695 aa10.13□□□□□ -0.79
GGA3-223ENST00000621870 MRRFQ96E11 262 aaKnown RBP10.13□□□□□ -0.79
GGA3-223ENST00000621870 TUBGCP2Q9BSJ2 902 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms