RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CTNND1O60716 968 aaKnown RBP19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 CIITAP33076 1130 aa19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 CTAGE1Q96RT6 745 aa19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 MRPL11Q9Y3B7 192 aaKnown RBP19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 KDM3AQ9Y4C1 1321 aa19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 GCOM1H8Y6P7 765 aaPredicted RBP19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 POLR2MP0CAP2 368 aa19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 HYIQ5T013 277 aa19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 PRAMEF18Q5VWM3 479 aa19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 C16orf45Q96MC5 204 aaPredicted RBP19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 LIMA1Q9UHB6 759 aaKnown RBP19.41■□□□□ 0.7
PCDHGC3-205ENST00000617641 POTEB3A0JP26 581 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 POTECB2RU33 542 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 KCNJ18B7U540 433 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 H7C1D1 291 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 CYP3A4P08684 503 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 ZNF76P36508 570 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 SPIRE1Q08AE8 756 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 KCNJ12Q14500 433 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 TCP11X2Q5H9J9 407 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 ANGEL2Q5VTE6 544 aaKnown RBP19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 POTEBQ6S5H4 581 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 CREBRFQ8IUR6 639 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 KIAA0895Q8NCT3 520 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 TRPM4Q8TD43 1214 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 KIAA1683Q9H0B3 1180 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 TBX3O15119 743 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 WDR46O15213 610 aaKnown RBP19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 MSH4O15457 936 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 TTI2Q6NXR4 508 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 CNNM4Q6P4Q7 775 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 UNC13DQ70J99 1090 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 IRF2BP1Q8IU81 584 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 DDX12PQ92771 950 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 DHTKD1Q96HY7 919 aaPredicted RBP19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 TRIM47Q96LD4 638 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 AGBL1Q96MI9 1066 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 NT5C3AQ9H0P0 336 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 SLC39A2Q9NP94 309 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 TRMT1Q9NXH9 659 aaKnown RBP19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 KIAA1024Q9UPX6 916 aa19.4■□□□□ 0.7
PCDHGC3-205ENST00000617641 UBXN2AP68543 259 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 FILIP1LQ4L180 1135 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 NCAPH2Q6IBW4 605 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 ARHGAP27Q6ZUM4 889 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 LPAR1Q92633 364 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 TAB2Q9NYJ8 693 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 ABCB11O95342 1321 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 PVALEFA0A1B0GWK0 134 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 E9PMD0 336 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 NRDCO43847 1150 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 MED24O75448 989 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 IDEP14735 1019 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 PBX1P40424 430 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 SPAG1Q07617 926 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 SLF1Q9BQI6 1058 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 VPS16Q9H269 839 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 CCPG1Q9ULG6 757 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 FZD1Q9UP38 647 aa19.39■□□□□ 0.69
PCDHGC3-205ENST00000617641 ZNF536O15090 1300 aa19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 SSBP05455 408 aaKnown RBP eCLIP19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 COPB1P53618 953 aaKnown RBP19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 MTMR2Q13614 643 aa19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 CCAR2Q8N163 923 aaKnown RBP19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 P2RX5Q93086 422 aa19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 FAM20AQ96MK3 541 aa19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 DUSP9Q99956 384 aaKnown RBP19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 SRRTQ9BXP5 876 aaKnown RBP19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 TMX1Q9H3N1 280 aa19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 GINM1Q9NU53 330 aa19.38■□□□□ 0.69
PCDHGC3-205ENST00000617641 IGLV3-22A0A075B6J6 115 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 LRRC10BA6NIK2 292 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 N4BP3O15049 544 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 CCNE1P24864 410 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 ADKP55263 362 aaKnown RBP19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 E4F1Q66K89 784 aaPredicted RBP19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 TEX2Q8IWB9 1127 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 TC2NQ8N9U0 490 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 PRPF38AQ8NAV1 312 aaKnown RBP19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 TANGO6Q9C0B7 1094 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 LRRC27Q9C0I9 530 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 GPRC5DQ9NZD1 345 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 POTEFA5A3E0 1075 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 ICAM1P05362 532 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 POTEIP0CG38 1075 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 DCAF15Q66K64 600 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 POTEGQ6S5H5 508 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 POTEEQ6S8J3 1075 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 CCDC112Q8NEF3 446 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 ANKRD20A12PQ8NF67 263 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 HOOK2Q96ED9 719 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 WDR18Q9BV38 432 aa19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 GTPBP4Q9BZE4 634 aaKnown RBP19.37■□□□□ 0.69
PCDHGC3-205ENST00000617641 DOCK1Q14185 1865 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 HAUS3Q68CZ6 603 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 ANKRD40Q6AI12 368 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 APOBEC3FQ8IUX4 373 aaKnown RBP19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 ZKSCAN4Q969J2 545 aaPredicted RBP19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 DNAJC19Q96DA6 116 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 THAP9Q9H5L6 903 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms