RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 MUM1L1Q5H9M0 696 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 FKBP1CQ5VVH2 108 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 ENOX1Q8TC92 643 aaKnown RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 KIAA1524Q8TCG1 905 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 PIGOQ8TEQ8 1089 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 LARP4BQ92615 738 aaKnown RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 ATG4CQ96DT6 458 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 SRRTQ9BXP5 876 aaKnown RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 TMX1Q9H3N1 280 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 PICK1Q9NRD5 415 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 EMILIN3Q9NT22 766 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 EXOC1Q9NV70 894 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 KBTBD4Q9NVX7 518 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 ABCB11O95342 1321 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 N4BP3O15049 544 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 MSH4O15457 936 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 KLRC4O43908 158 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 ZNF500O60304 480 aaPredicted RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 TBC1D12O60347 775 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 MED24O75448 989 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 KRT18P05783 430 aaKnown RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 ARP10275 920 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 VCAM1P19320 739 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 SFPQP23246 707 aaKnown RBP eCLIP3.85□□□□□ -1.79
LIG4-205ENST00000614526 SP4Q02446 784 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 ZNF658Q5TYW1 1059 aaPredicted RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 SPATA1Q5VX52 437 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 C9orf131Q5VYM1 1079 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 PPP4R3AQ6IN85 833 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 PPP1R18Q6NYC8 613 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 MAEAQ7L5Y9 396 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 TPH2Q8IWU9 490 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 NELFCDQ8IXH7 590 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 FAM177A1Q8N128 213 aaPredicted RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 TRIML1Q8N9V2 468 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 IL31RAQ8NI17 732 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 TSC1Q92574 1164 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 DDX12PQ92771 950 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 TRIM47Q96LD4 638 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 AK8Q96MA6 479 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 RAB34Q9BZG1 259 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 ZNF408Q9H9D4 720 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 COL20A1Q9P218 1284 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 RIPK3Q9Y572 518 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 FOCADQ5VW36 1801 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 CENPFP49454 3210 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 EML1O00423 815 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 CTNND1O60716 968 aaKnown RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 CEP135Q66GS9 1140 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 BTNL9Q6UXG8 535 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 PRPF38AQ8NAV1 312 aaKnown RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 SLF1Q9BQI6 1058 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 WDR18Q9BV38 432 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 FGFBP2Q9BYJ0 223 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 SH2D4AQ9H788 454 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 FEM1BQ9UK73 627 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 RGPD3A6NKT7 1758 aaPredicted RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 RGPD4Q7Z3J3 1758 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 PRKCSHP14314 528 aaPredicted RBP3.84□□□□□ -1.79
LIG4-205ENST00000614526 ZNF18P17022 549 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 PTPRAP18433 802 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 ERCC5P28715 1186 aaPredicted RBP3.84□□□□□ -1.79
LIG4-205ENST00000614526 FXR2P51116 673 aaKnown RBP eCLIP3.84□□□□□ -1.79
LIG4-205ENST00000614526 USP11P51784 963 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 MKRN3Q13064 507 aaKnown RBP3.84□□□□□ -1.79
LIG4-205ENST00000614526 GPR162Q16538 588 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 ANKRD40Q6AI12 368 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 CATSPER3Q86XQ3 398 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 RAD54LQ92698 747 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 LENG9Q96B70 501 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 TAAR1Q96RJ0 339 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 WDR11Q9BZH6 1224 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 RANBP17Q9H2T7 1088 aaKnown RBP3.84□□□□□ -1.79
LIG4-205ENST00000614526 RMND1Q9NWS8 449 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 MRPL11Q9Y3B7 192 aaKnown RBP3.84□□□□□ -1.79
LIG4-205ENST00000614526 SAMM50Q9Y512 469 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 ZNF536O15090 1300 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 KCNJ18B7U540 433 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 CBFA2T2O43439 604 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 OFD1O75665 1012 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 PLA2G4BP0C869 781 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 SREBF1P36956 1147 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 CCZ1BP86790 482 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 CCZ1P86791 482 aaPredicted RBP3.84□□□□□ -1.79
LIG4-205ENST00000614526 AMPD3Q01432 767 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 AP3B2Q13367 1082 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 KCNJ12Q14500 433 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 PDIA5Q14554 519 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 KRT31Q15323 416 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 HERC4Q5GLZ8 1057 aaPredicted RBP3.84□□□□□ -1.79
LIG4-205ENST00000614526 LRCH2Q5VUJ6 765 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 DCAF15Q66K64 600 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 GPBP1Q86WP2 473 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 ELOA2Q8IYF1 753 aaPredicted RBP3.84□□□□□ -1.79
LIG4-205ENST00000614526 SCYL3Q8IZE3 742 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 ADSSL1Q8N142 457 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 GPC2Q8N158 579 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 CSGALNACT2Q8N6G5 542 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 KIAA0895Q8NCT3 520 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms