RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 SLC37A4O43826 429 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 CCNT1O60563 726 aaKnown RBP9.19□□□□□ -0.94
TARDBP-213ENST00000611963 TDP2O95551 362 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 CFBP00751 764 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 ALAS1P13196 640 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 PFKFB1P16118 471 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 CMA1P23946 247 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 FAM160A1Q05DH4 1040 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 TRAF1Q13077 416 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 SNW1Q13573 536 aaKnown RBP9.19□□□□□ -0.94
TARDBP-213ENST00000611963 IL17AQ16552 155 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 MUM1L1Q5H9M0 696 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 RESP18Q5W5W9 173 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 FCHSD1Q86WN1 690 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 REPS2Q8NFH8 660 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 ENGASEQ8NFI3 743 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 CSRNP2Q9H175 543 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 NUP62CLQ9H1M0 184 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 CLSTN2Q9H4D0 955 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 DDX19AQ9NUU7 478 aaKnown RBP9.19□□□□□ -0.94
TARDBP-213ENST00000611963 KCNH4Q9UQ05 1017 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 SRPRBQ9Y5M8 271 aaKnown RBP9.19□□□□□ -0.94
TARDBP-213ENST00000611963 MORC2Q9Y6X9 1032 aaPredicted RBP9.19□□□□□ -0.94
TARDBP-213ENST00000611963 VWA3AA6NCI4 1184 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 GCOM1H8Y6P7 765 aaPredicted RBP9.18□□□□□ -0.94
TARDBP-213ENST00000611963 NFIBO00712 420 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 CXCL11O14625 94 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 NEMFO60524 1076 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 PEX10O60683 326 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 SLC34A2O95436 690 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 ALDH1A1P00352 501 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 POLR2MP0CAP2 368 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 CAP1Q01518 475 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 CRHR2Q13324 411 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 AP3B2Q13367 1082 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 MOGSQ13724 837 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 MFSD10Q14728 455 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 COG2Q14746 738 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 CAMK4Q16566 473 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 USP49Q70CQ1 688 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 CTU1Q7Z7A3 348 aaKnown RBP9.18□□□□□ -0.94
TARDBP-213ENST00000611963 FMR1NBQ8N0W7 255 aaPredicted RBP9.18□□□□□ -0.94
TARDBP-213ENST00000611963 FAM43AQ8N2R8 423 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 CLEC4DQ8WXI8 215 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 FERMT2Q96AC1 680 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 HPSEQ9Y251 543 aa9.18□□□□□ -0.94
TARDBP-213ENST00000611963 MCM3APO60318 1980 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 CCL15-CCL14A0A0B4J2E2 113 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 CCDC85CA6NKD9 419 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 SPDYE3A6NKU9 549 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 PIK3CDO00329 1044 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 KINO60870 393 aaKnown RBP9.17□□□□□ -0.94
TARDBP-213ENST00000611963 FKTNO75072 461 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 OR52Z1P0C646 297 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 FDX1P10109 184 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 SYKP43405 635 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 GTF2A2P52657 109 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 ZNF445P59923 1031 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 ARHGAP4P98171 946 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 PLS1Q14651 629 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 TMEM132BQ14DG7 1078 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 CALCRLQ16602 461 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 CCL15Q16663 113 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 SNRNP48Q6IEG0 339 aaKnown RBP9.17□□□□□ -0.94
TARDBP-213ENST00000611963 GAS2L3Q86XJ1 694 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 CKAP2LQ8IYA6 745 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 PROCA1Q8NCQ7 364 aaPredicted RBP9.17□□□□□ -0.94
TARDBP-213ENST00000611963 SYMPKQ92797 1274 aaKnown RBP9.17□□□□□ -0.94
TARDBP-213ENST00000611963 TRERF1Q96PN7 1200 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 UIMC1Q96RL1 719 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 TNMDQ9H2S6 317 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 RNF146Q9NTX7 359 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 ZNF214Q9UL59 606 aaPredicted RBP9.17□□□□□ -0.94
TARDBP-213ENST00000611963 KCNH3Q9ULD8 1083 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 ADAMTS5Q9UNA0 930 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 LHX6Q9UPM6 363 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 RIPK3Q9Y572 518 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 DOCK5Q9H7D0 1870 aa9.17□□□□□ -0.94
TARDBP-213ENST00000611963 DOCK3Q8IZD9 2030 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 MYPNQ86TC9 1320 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 WDR81Q562E7 1941 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 A0A087X0B3 334 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 FAM237AA0A1B0GTK4 181 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 PP2D1A8MPX8 630 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 ZNF202O95125 648 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 FOSP01100 380 aaPredicted RBP9.16□□□□□ -0.94
TARDBP-213ENST00000611963 SREBF1P36956 1147 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 HSD17B4P51659 736 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 UBXN2AP68543 259 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 IRX3P78415 501 aaPredicted RBP9.16□□□□□ -0.94
TARDBP-213ENST00000611963 ORC2Q13416 577 aaPredicted RBP9.16□□□□□ -0.94
TARDBP-213ENST00000611963 SNAPC2Q13487 334 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 ARL6IP4Q66PJ3 421 aaKnown RBP9.16□□□□□ -0.94
TARDBP-213ENST00000611963 GPAT2Q6NUI2 795 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 LRSAM1Q6UWE0 723 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 SLC30A10Q6XR72 485 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 DTHD1Q6ZMT9 781 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 PDILTQ8N807 584 aa9.16□□□□□ -0.94
TARDBP-213ENST00000611963 PTCD2Q8WV60 388 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms