RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 CCDC96Q2M329 555 aa11.92□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 ADSSL1Q8N142 457 aa11.92□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 COPS5Q92905 334 aa11.92□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 PBXIP1Q96AQ6 731 aa11.92□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 CRBNQ96SW2 442 aa11.92□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 CERS4Q9HA82 394 aa11.92□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 TRMT13Q9NUP7 481 aaKnown RBP11.92□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 RBM47A0AV96 593 aaKnown RBP11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 GRXCR2A6NFK2 248 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 H0Y858 1186 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 TLR3O15455 904 aaKnown RBP11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 ARIH2O95376 493 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 PDHBP11177 359 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 PDE1AP54750 535 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 HAND2P61296 217 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 PURAQ00577 322 aaKnown RBP11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 ZP2Q05996 745 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 NMIQ13287 307 aaPredicted RBP11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 TTLL4Q14679 1199 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 ALX1Q15699 326 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 DUSP28Q4G0W2 176 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 SYDE2Q5VT97 1194 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 IQSEC1Q6DN90 963 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 KIAA1211Q6ZU35 1233 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 SPRED2Q7Z698 418 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 DCAF4Q8WV16 495 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 ALDH8A1Q9H2A2 487 aaPredicted RBP11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 VTA1Q9NP79 307 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 GPCPD1Q9NPB8 672 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 TLR9Q9NR96 1032 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 PCDHA11Q9Y5I1 949 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 HELZ2Q9BYK8 2649 aaKnown RBP11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 FRYQ5TBA9 3013 aa11.91□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 NEDD4P46934 1319 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 CABYRO75952 493 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 FGBP02675 491 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 SLC3A2P08195 630 aaKnown RBP11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 KCNA5P22460 613 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 EDNRBP24530 442 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 NBL1P41271 181 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 HERC4Q5GLZ8 1057 aaPredicted RBP11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 RRP12Q5JTH9 1297 aaKnown RBP11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 CTAGE1Q96RT6 745 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 AP5M1Q9H0R1 490 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 DOCK5Q9H7D0 1870 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 MUTYHQ9UIF7 546 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 Q9Y3F1 56 aa11.9□□□□□ -0.5
MIA-RAB4B-201ENST00000600729 TMEM221A6NGB7 291 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 C19orf67A6NJJ6 358 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 M0R296 226 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 SNHG28P0DPA3 235 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 HSPD1P10809 573 aaKnown RBP11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 LRRFIP1Q32MZ4 808 aaKnown RBP11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ANKRD45Q5TZF3 282 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 FBXL6Q8N531 539 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 TBC1D5Q92609 795 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 EVI5LQ96CN4 794 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 WDR11Q9BZH6 1224 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 HELLSQ9NRZ9 838 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 TCP11L1Q9NUJ3 509 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 COL20A1Q9P218 1284 aa11.89□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 TNKSO95271 1327 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ZMYM6O95789 1325 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 OTOGLQ3ZCN5 2332 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 PTPDC1A2A3K4 754 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 MYL3P08590 195 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 GOLGA8HP0CJ92 632 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 CALML3P27482 149 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 IRS1P35568 1242 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 VCPP55072 806 aaKnown RBP11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 RPS6P62753 249 aaKnown RBP11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ZNF543Q08ER8 600 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 PUM1Q14671 1186 aaKnown RBP eCLIP11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 GPNMBQ14956 572 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 TCTN1Q2MV58 587 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 UPF3BQ9BZI7 483 aaKnown RBP11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ATG2AQ2TAZ0 1938 aa11.88□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 CEP295Q9C0D2 2601 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 CA3P07451 260 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 GRB10Q13322 594 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 NBPF20Q3BBV1 942 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 MCMDC2Q4G0Z9 681 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 RNF207Q6ZRF8 634 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 DEFB128Q7Z7B8 93 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 OR6J1Q8NGC5 347 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 EDAQ92838 391 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 IL25Q9H293 177 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 SH2B1Q9NRF2 756 aaPredicted RBP11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 TOMM22Q9NS69 142 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 SIP14410 1827 aa11.87□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 WDR19Q8NEZ3 1342 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 MICAL3Q7RTP6 2002 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 LPXNO60711 386 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms