RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, human

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-222	ENST00000592763	TNFRSF25	Q93038	417 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	MRFAP1L1	Q96HT8	127 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	NUDT12	Q9BQG2	462 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	TUBE1	Q9UJT0	475 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	NPHP3-ACAD11	A0A0J9YXS1	232 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	PLA2G4B	P0C869	781 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	DCAF17	Q5H9S7	520 aa	Predicted RBP	12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	CCDC150	Q8NCX0	1101 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	RNF146	Q9NTX7	359 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	BICDL2	A1A5D9	508 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	NFIB	O00712	420 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	IKBKB	O14920	756 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	AP3B2	Q13367	1082 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	MCF2L2	Q86YR7	1114 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	LRRC8A	Q8IWT6	810 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	GMCL1	Q96IK5	515 aa		12.08	□□□□□ -0.48
ILF3-222	ENST00000592763	UQCRHL	A0A096LP55	91 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	UQCRH	P07919	91 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	ARHGAP29	Q52LW3	1261 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	FAM26F	Q5R3K3	315 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	MOB2	Q70IA6	237 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	DAGLB	Q8NCG7	672 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	ENOX1	Q8TC92	643 aa	Known RBP	12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	ESYT2	A0FGR8	921 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	CTNND1	O60716	968 aa	Known RBP	12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	TDRD12	Q587J7	1177 aa	Known RBP	12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	PPP1R18	Q6NYC8	613 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	BANK1	Q8NDB2	785 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	CRACR2A	Q9BSW2	395 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	SYT17	Q9BSW7	474 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	LZTFL1	Q9NQ48	299 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.07	□□□□□ -0.48	3e-6	■■■■■ 38.5
ILF3-222	ENST00000592763	SCN7A	Q01118	1682 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	LRP5	O75197	1615 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	WNK3	Q9BYP7	1800 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	KIF20A	O95235	890 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	CD44	P16070	742 aa	Known RBP	12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	DPYD	Q12882	1025 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	STK4	Q13043	487 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	SPECC1L	Q69YQ0	1117 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	NLRX1	Q86UT6	975 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	SIAH1	Q8IUQ4	282 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	CCDC112	Q8NEF3	446 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	MKL1	Q969V6	931 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	RABGAP1	Q9Y3P9	1069 aa		12.07	□□□□□ -0.48
ILF3-222	ENST00000592763	CCDC169	A6NNP5	214 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	FGFR1OP	O95684	399 aa	Known RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	VCAM1	P19320	739 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	ERCC5	P28715	1186 aa	Predicted RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	SEPT14	Q6ZU15	432 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	GMCL1P1	Q8NEA9	526 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	PURB	Q96QR8	312 aa	Known RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	GML	Q99445	158 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	BAG1	Q99933	345 aa	Predicted RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	TRIM9	Q9C026	710 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	COL5A3	P25940	1745 aa	Predicted RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	TEX33	O43247	280 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	BMP6	P22004	513 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	PDE4C	Q08493	712 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	BAAT	Q14032	418 aa	Predicted RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	KIAA1755	Q5JYT7	1200 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	FAM114A1	Q8IWE2	563 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	DESI2	Q9BSY9	194 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	CCSER1	Q9C0I3	900 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	GPRC5D	Q9NZD1	345 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	DUOX1	Q9NRD9	1551 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	BRWD3	Q6RI45	1802 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	KDM3A	Q9Y4C1	1321 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	IGKV6D-41	A0A0C4DH26	115 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	IBSP	P21815	317 aa	Predicted RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	IREB2	P48200	963 aa	Known RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	UTP14C	Q5TAP6	766 aa	Known RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	MYOCD	Q8IZQ8	938 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	TEKT3	Q9BXF9	490 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	SEPT11	Q9NVA2	429 aa	Known RBP	12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	PCDHB13	Q9Y5F0	798 aa		12.06	□□□□□ -0.48
ILF3-222	ENST00000592763	IPO5	O00410	1097 aa	Known RBP	12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	PEX10	O60683	326 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	URI1	O94763	535 aa	Predicted RBP	12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	SNHG28	P0DPA3	235 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	KRT9	P35527	623 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	DNA2	P51530	1060 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	USP11	P51784	963 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	MYMK	A6NI61	221 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763		B4DLN1	442 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	AKR1B15	C9JRZ8	316 aa	Predicted RBP	12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	WDR46	O15213	610 aa	Known RBP	12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	PRPH	P41219	470 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	CEP55	Q53EZ4	464 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	SCYL3	Q8IZE3	742 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	ZNF397	Q8NF99	534 aa	Predicted RBP	12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	DYDC2	Q96IM9	177 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	FAM86B1	E9PN63	330 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	USO1	O60763	962 aa	Known RBP	12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	FAM86B2	P0C5J1	330 aa		12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	RPS6	P62753	249 aa	Known RBP	12.05	□□□□□ -0.48
ILF3-222	ENST00000592763	MTMR1	Q13613	665 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms