RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 MB21D1Q8N884 522 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 CTCFLQ8NI51 663 aaPredicted RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 SOCS4Q8WXH5 440 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 TIFAQ96CG3 184 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 DDX11Q96FC9 970 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 ZFP91Q96JP5 570 aaPredicted RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 PGBD1Q96JS3 809 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 TRERF1Q96PN7 1200 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 NUDT12Q9BQG2 462 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 PHF20Q9BVI0 1012 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 SLC26A6Q9BXS9 759 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 RNF26Q9BY78 433 aaPredicted RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 PRDM12Q9H4Q4 367 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 PRDM5Q9NQX1 630 aaPredicted RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 HOMER2Q9NSB8 354 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 RBM28Q9NW13 759 aaKnown RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 BARHL2Q9NY43 387 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 CXXC1Q9P0U4 656 aaPredicted RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 PRKAG2Q9UGJ0 569 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 CCPG1Q9ULG6 757 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 KCNJ14Q9UNX9 436 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 SCN5AQ14524 2016 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 FAM186AA6NE01 2351 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 RIF1Q5UIP0 2472 aaKnown RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 PTPRZ1P23471 2315 aaPredicted RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 MYH7BA7E2Y1 1941 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 ATG2AQ2TAZ0 1938 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 KMT2EQ8IZD2 1858 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 PIK3CDO00329 1044 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 CTAGE5O15320 804 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 GPR37L1O60883 481 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 ZBED4O75132 1171 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 ARIH2O95376 493 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 SCG2P13521 617 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 PABPC4Q13310 644 aaKnown RBP eCLIP7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 CCDC85BQ15834 202 aaPredicted RBP7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 TMEM31Q5JXX7 168 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 PRAMEF19Q5SWL8 479 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 TAPT1Q6NXT6 567 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 SLC39A5Q6ZMH5 540 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 PLEKHH3Q7Z736 793 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 FBXO11Q86XK2 927 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 LENG9Q96B70 501 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 MAML3Q96JK9 1138 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 APBA2Q99767 749 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 LZTS2Q9BRK4 669 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 PBX4Q9BYU1 374 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 ZMYND12Q9H0C1 365 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 SLKQ9H2G2 1235 aaPredicted RBP7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 DDX20Q9UHI6 824 aaKnown RBP7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 PCDHA1Q9Y5I3 950 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 TECTAO75443 2155 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 C5orf42Q9H799 3197 aa7.03□□□□□ -1.28
LDLRAD4-213ENST00000590115 ABCB11O95342 1321 aa7.02□□□□□ -1.28
LDLRAD4-213ENST00000590115 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 ESYT2A0FGR8 921 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 SLC15A5A6NIM6 579 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 GRXCR1A8MXD5 290 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 K7ELQ4 463 aaPredicted RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 SLC25A27O95847 323 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 ZNF865P0CJ78 1059 aaPredicted RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 FDX1P10109 184 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 TOB1P50616 345 aaPredicted RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 FOSBP53539 338 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 MAP2K5Q13163 448 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 NR5A1Q13285 461 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 PLS1Q14651 629 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 ANKRD1Q15327 319 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 GJC2Q5T442 439 aaPredicted RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 NCAPG2Q86XI2 1143 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 TRMT44Q8IYL2 757 aaKnown RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 ABRAQ8N0Z2 381 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 DAGLBQ8NCG7 672 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 CHST13Q8NET6 341 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 TET1Q8NFU7 2136 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 CYP2W1Q8TAV3 490 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 GTF3C2Q8WUA4 911 aaPredicted RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 LENG1Q96BZ8 264 aaPredicted RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 GAS2L1Q99501 681 aaPredicted RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 AMNQ9BXJ7 453 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 MROH8Q9H579 483 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 ACAD9Q9H845 621 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 RIC8AQ9NPQ8 531 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 PDGFCQ9NRA1 345 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 FOXD4L1Q9NU39 408 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 ORC3Q9UBD5 711 aaPredicted RBP7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 PCDHA6Q9UN73 950 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 PCDHA8Q9Y5H6 950 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 CACNA1GO43497 2377 aa7.02□□□□□ -1.29
LDLRAD4-213ENST00000590115 PLXNA3P51805 1871 aa7.01□□□□□ -1.29
LDLRAD4-213ENST00000590115 DOCK5Q9H7D0 1870 aa7.01□□□□□ -1.29
LDLRAD4-213ENST00000590115 IGLV3-22A0A075B6J6 115 aa7.01□□□□□ -1.29
LDLRAD4-213ENST00000590115 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.01□□□□□ -1.29
LDLRAD4-213ENST00000590115 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.01□□□□□ -1.29
LDLRAD4-213ENST00000590115 RBM47A0AV96 593 aaKnown RBP7.01□□□□□ -1.29
LDLRAD4-213ENST00000590115 CYBAP13498 195 aa7.01□□□□□ -1.29
LDLRAD4-213ENST00000590115 ITGB5P18084 799 aa7.01□□□□□ -1.29
LDLRAD4-213ENST00000590115 GJB2P29033 226 aa7.01□□□□□ -1.29
LDLRAD4-213ENST00000590115 MAPK4P31152 587 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms