RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 P2RX7Q99572 595 aaKnown RBP15.89■□□□□ 0.13
LIG3-205ENST00000585941 PICK1Q9NRD5 415 aa15.89■□□□□ 0.13
LIG3-205ENST00000585941 MAP3K20Q9NYL2 800 aaKnown RBP15.89■□□□□ 0.13
LIG3-205ENST00000585941 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.89■□□□□ 0.13
LIG3-205ENST00000585941 PITPNM2Q9BZ72 1349 aa15.89■□□□□ 0.13
LIG3-205ENST00000585941 A0A1B0GTH6 734 aa15.89■□□□□ 0.13
LIG3-205ENST00000585941 BICDL2A1A5D9 508 aa15.89■□□□□ 0.13
LIG3-205ENST00000585941 HOXA13P31271 388 aaPredicted RBP15.89■□□□□ 0.13
LIG3-205ENST00000585941 CCT6AP40227 531 aaKnown RBP15.89■□□□□ 0.13
LIG3-205ENST00000585941 STX17P56962 302 aa15.89■□□□□ 0.13
LIG3-205ENST00000585941 PDE4DQ08499 809 aa15.89■□□□□ 0.13
LIG3-205ENST00000585941 LRMPQ12912 555 aa15.89■□□□□ 0.13
LIG3-205ENST00000585941 ANGEL2Q5VTE6 544 aaKnown RBP15.89■□□□□ 0.13
LIG3-205ENST00000585941 MCF2L2Q86YR7 1114 aa15.89■□□□□ 0.13
LIG3-205ENST00000585941 NAP1L5Q96NT1 182 aaPredicted RBP15.89■□□□□ 0.13
LIG3-205ENST00000585941 BMP2KQ9NSY1 1161 aaPredicted RBP15.89■□□□□ 0.13
LIG3-205ENST00000585941 INPP5BP32019 993 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 PSMD2Q13200 908 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 SUPT20HL1Q3ZLR7 823 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 UNC13DQ70J99 1090 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 CCDC112Q8NEF3 446 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 LENG9Q96B70 501 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 FBXO28Q9NVF7 368 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 CCPG1Q9ULG6 757 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 GDAQ9Y2T3 454 aa15.88■□□□□ 0.13
LIG3-205ENST00000585941 LRRC10BA6NIK2 292 aa15.87■□□□□ 0.13
LIG3-205ENST00000585941 SKILP12757 684 aa15.87■□□□□ 0.13
LIG3-205ENST00000585941 KCNJ6P48051 423 aa15.87■□□□□ 0.13
LIG3-205ENST00000585941 GHRHRQ02643 423 aa15.87■□□□□ 0.13
LIG3-205ENST00000585941 MCM6Q14566 821 aa15.87■□□□□ 0.13
LIG3-205ENST00000585941 NR1I3Q14994 352 aa15.87■□□□□ 0.13
LIG3-205ENST00000585941 SPECC1LQ69YQ0 1117 aa15.87■□□□□ 0.13
LIG3-205ENST00000585941 CCDC84Q86UT8 332 aaPredicted RBP15.87■□□□□ 0.13
LIG3-205ENST00000585941 LIMA1Q9UHB6 759 aaKnown RBP15.87■□□□□ 0.13
LIG3-205ENST00000585941 SCAF8Q9UPN6 1271 aaKnown RBP15.87■□□□□ 0.13
LIG3-205ENST00000585941 C19orf81C9J6K1 198 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 FAM86B1E9PN63 330 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 FAM86B2P0C5J1 330 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 HSD17B4P51659 736 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 BACE1P56817 501 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 SETQ01105 290 aaPredicted RBP15.86■□□□□ 0.13
LIG3-205ENST00000585941 ZNF280CQ8ND82 737 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 TRPM4Q8TD43 1214 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 WRNIP1Q96S55 665 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 TANGO6Q9C0B7 1094 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 THAP9Q9H5L6 903 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 SLC38A10Q9HBR0 1119 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 GGA3Q9NZ52 723 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 PPP1R9AQ9ULJ8 1098 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 CTDP1Q9Y5B0 961 aaPredicted RBP15.86■□□□□ 0.13
LIG3-205ENST00000585941 RBBP6Q7Z6E9 1792 aaKnown RBP15.86■□□□□ 0.13
LIG3-205ENST00000585941 MYMKA6NI61 221 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 ZBED4O75132 1171 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 VCAM1P19320 739 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 RPA1P27694 616 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 CCZ1BP86790 482 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 CCZ1P86791 482 aaPredicted RBP15.86■□□□□ 0.13
LIG3-205ENST00000585941 SPIRE1Q08AE8 756 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 MTMR2Q13614 643 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 NOL9Q5SY16 702 aaKnown RBP15.86■□□□□ 0.13
LIG3-205ENST00000585941 APTXQ7Z2E3 356 aaKnown RBP15.86■□□□□ 0.13
LIG3-205ENST00000585941 C12orf42Q96LP6 360 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 NUDT12Q9BQG2 462 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 KCND1Q9NSA2 647 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 INTS13Q9NVM9 706 aa15.86■□□□□ 0.13
LIG3-205ENST00000585941 ADD3Q9UEY8 706 aaKnown RBP15.86■□□□□ 0.13
LIG3-205ENST00000585941 ZNF536O15090 1300 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 IGLV3-22A0A075B6J6 115 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 MSH4O15457 936 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 FLOT1O75955 427 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 PTPRAP18433 802 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 CCNE1P24864 410 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 EEF1GP26641 437 aaKnown RBP15.85■□□□□ 0.13
LIG3-205ENST00000585941 SPP2Q13103 211 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 TBX2Q13207 712 aaPredicted RBP15.85■□□□□ 0.13
LIG3-205ENST00000585941 HSP90AA4PQ58FG1 418 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 ARMCX5Q6P1M9 558 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 FOXR2Q6PJQ5 311 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 KRT26Q7Z3Y9 468 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 FAM114A1Q8IWE2 563 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 FHDC1Q9C0D6 1143 aaPredicted RBP15.85■□□□□ 0.13
LIG3-205ENST00000585941 EMILIN3Q9NT22 766 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 PARP14Q460N5 1801 aa15.85■□□□□ 0.13
LIG3-205ENST00000585941 EPS15P42566 896 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 TERF1P54274 439 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 ARID5BQ14865 1188 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 CEP55Q53EZ4 464 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 TCP11X2Q5H9J9 407 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 DNTTIP2Q5QJE6 756 aaKnown RBP15.84■□□□□ 0.13
LIG3-205ENST00000585941 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
LIG3-205ENST00000585941 DDX12PQ92771 950 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 P2RX5Q93086 422 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 KLRG1Q96E93 195 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 TRIM47Q96LD4 638 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 POLR3CQ9BUI4 534 aaPredicted RBP15.84■□□□□ 0.13
LIG3-205ENST00000585941 RPAP3Q9H6T3 665 aaPredicted RBP15.84■□□□□ 0.13
LIG3-205ENST00000585941 ADARB2Q9NS39 739 aaKnown RBP15.84■□□□□ 0.13
LIG3-205ENST00000585941 KIAA1024Q9UPX6 916 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 MAPK8IP1Q9UQF2 711 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms