RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 SLC16A2P36021 539 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 CPT1AP50416 773 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 HYAL1Q12794 435 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 ZNF618Q5T7W0 954 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 TTBK2Q6IQ55 1244 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 TRIM67Q6ZTA4 783 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 CHST3Q7LGC8 479 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 KAT2BQ92831 832 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 ATOH1Q92858 354 aaPredicted RBP13.53□□□□□ -0.24
NUP85-224ENST00000583948 SEZ6LQ9BYH1 1024 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 BACH2Q9BYV9 841 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 EPB41L4AQ9HCS5 686 aaPredicted RBP13.53□□□□□ -0.24
NUP85-224ENST00000583948 CACNA1HO95180 2353 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 DMXL1Q9Y485 3027 aa13.53□□□□□ -0.24
NUP85-224ENST00000583948 STXBP3O00186 592 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 NMT2O60551 498 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 KRT37O76014 449 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 MX1P20591 662 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 CALML3P27482 149 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 PUS10Q3MIT2 529 aaKnown RBP13.52□□□□□ -0.25
NUP85-224ENST00000583948 AMOTL1Q8IY63 956 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 CLASRPQ8N2M8 674 aaKnown RBP13.52□□□□□ -0.25
NUP85-224ENST00000583948 AFAP1L1Q8TED9 768 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 AFG1LQ8WV93 481 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 MKL1Q969V6 931 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 ALG1Q9BT22 464 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 HDAC6Q9UBN7 1215 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 PRKAG3Q9UGI9 489 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 CCPG1Q9ULG6 757 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 PRR12Q9ULL5 1215 aa13.52□□□□□ -0.25
NUP85-224ENST00000583948 RBM47A0AV96 593 aaKnown RBP13.51□□□□□ -0.25
NUP85-224ENST00000583948 PTPDC1A2A3K4 754 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 A6NJR5 290 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 H3BNC9 293 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 GRM6O15303 877 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 IFIT2P09913 472 aaKnown RBP13.51□□□□□ -0.25
NUP85-224ENST00000583948 ARP10275 920 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 STAT2P52630 851 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 PDE1AP54750 535 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 IKBKEQ14164 716 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 COL19A1Q14993 1142 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 SMAD2Q15796 467 aaKnown RBP13.51□□□□□ -0.25
NUP85-224ENST00000583948 LY6KQ17RY6 165 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 TRIM71Q2Q1W2 868 aaKnown RBP13.51□□□□□ -0.25
NUP85-224ENST00000583948 BMP2KLQ5H9B9 411 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 TTC22Q5TAA0 569 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 TSHZ3Q63HK5 1081 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 STAG1Q8WVM7 1258 aa13.51□□□□□ -0.25
NUP85-224ENST00000583948 NSUN3Q9H649 340 aaKnown RBP13.51□□□□□ -0.25
NUP85-224ENST00000583948 RIF1Q5UIP0 2472 aaKnown RBP13.5□□□□□ -0.25
NUP85-224ENST00000583948 SALL3Q9BXA9 1300 aa13.5□□□□□ -0.25
NUP85-224ENST00000583948 ABHD14A-ACY1A0A1B0GW23 586 aa13.5□□□□□ -0.25
NUP85-224ENST00000583948 TXNP10599 105 aaKnown RBP13.5□□□□□ -0.25
NUP85-224ENST00000583948 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
NUP85-224ENST00000583948 HTRA4P83105 476 aaPredicted RBP13.5□□□□□ -0.25
NUP85-224ENST00000583948 ZXDAP98168 799 aa13.5□□□□□ -0.25
NUP85-224ENST00000583948 PPP2R5BQ15173 497 aa13.5□□□□□ -0.25
NUP85-224ENST00000583948 TMEM192Q8IY95 271 aa13.5□□□□□ -0.25
NUP85-224ENST00000583948 GMCL1P1Q8NEA9 526 aa13.5□□□□□ -0.25
NUP85-224ENST00000583948 STRBPQ96SI9 672 aaKnown RBP13.5□□□□□ -0.25
NUP85-224ENST00000583948 UPF3BQ9BZI7 483 aaKnown RBP13.5□□□□□ -0.25
NUP85-224ENST00000583948 INSL6Q9Y581 213 aa13.5□□□□□ -0.25
NUP85-224ENST00000583948 TTLL1O95922 423 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 ZNF286BP0CG31 522 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 SLC1A4P43007 532 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 PDE4BQ07343 736 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 PTPROQ16827 1216 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 CTC1Q2NKJ3 1217 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
NUP85-224ENST00000583948 TIGD5Q53EQ6 642 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 TMED8Q6PL24 325 aaPredicted RBP13.49□□□□□ -0.25
NUP85-224ENST00000583948 SUGP1Q8IWZ8 645 aaKnown RBP13.49□□□□□ -0.25
NUP85-224ENST00000583948 ZNF444Q8N0Y2 327 aaPredicted RBP13.49□□□□□ -0.25
NUP85-224ENST00000583948 FBXL6Q8N531 539 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 CAGE1Q8TC20 777 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
NUP85-224ENST00000583948 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 ARPP21Q9UBL0 812 aaPredicted RBP13.49□□□□□ -0.25
NUP85-224ENST00000583948 RBM19Q9Y4C8 960 aaKnown RBP13.49□□□□□ -0.25
NUP85-224ENST00000583948 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
NUP85-224ENST00000583948 MMP3P08254 477 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 RBM10P98175 930 aaKnown RBP13.48□□□□□ -0.25
NUP85-224ENST00000583948 TFAP4Q01664 338 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 PTPN11Q06124 597 aaPredicted RBP13.48□□□□□ -0.25
NUP85-224ENST00000583948 TKFCQ3LXA3 575 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 SBK1Q52WX2 424 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 BMP8AQ7Z5Y6 402 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 FBXO11Q86XK2 927 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 CLEC4DQ8WXI8 215 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 TBC1D5Q92609 795 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 OSBP2Q969R2 916 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 DDRGK1Q96HY6 314 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 YME1L1Q96TA2 773 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 OSBPL3Q9H4L5 887 aa13.48□□□□□ -0.25
NUP85-224ENST00000583948 DNAH14Q0VDD8 3507 aa13.47□□□□□ -0.25
NUP85-224ENST00000583948 FRMPD2Q68DX3 1309 aaPredicted RBP13.47□□□□□ -0.25
NUP85-224ENST00000583948 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.47□□□□□ -0.25
NUP85-224ENST00000583948 AVPR2P30518 371 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 217.3 ms