RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	FOXR2	Q6PJQ5	311 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	FAM114A1	Q8IWE2	563 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	CCDC150	Q8NCX0	1101 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	LARP4B	Q92615	738 aa	Known RBP	11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	KLRG1	Q96E93	195 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	TANGO6	Q9C0B7	1094 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	ZNF408	Q9H9D4	720 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	SLC38A10	Q9HBR0	1119 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	EXOC1	Q9NV70	894 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	GGA3	Q9NZ52	723 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	PPP1R9A	Q9ULJ8	1098 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	POLR2A	P24928	1970 aa	Known RBP	11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	SYNRG	Q9UMZ2	1314 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	FOXN1	O15353	648 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	SLC37A4	O43826	429 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	FLOT1	O75955	427 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	PTPRA	P18433	802 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	CCT6A	P40227	531 aa	Known RBP	11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	IREB2	P48200	963 aa	Known RBP	11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	HSD17B4	P51659	736 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	HIRA	P54198	1017 aa	Predicted RBP	11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	MAP3K9	P80192	1104 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	SPP2	Q13103	211 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	PAK1	Q13153	545 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	CUL4B	Q13620	913 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	COG2	Q14746	738 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	ZYX	Q15942	572 aa	Known RBP	11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	NAALADL2	Q58DX5	795 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	CCDC174	Q6PII3	467 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	NEK9	Q8TD19	979 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	TRIM9	Q9C026	710 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	IFNK	Q9P0W0	207 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	NFE2L3	Q9Y4A8	694 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	CSAD	Q9Y600	493 aa		11.11	□□□□□ -0.63
TRIM16-222	ENST00000581224	TRPM7	Q96QT4	1865 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	PPP1R3G	B7ZBB8	358 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	TRAF5	O00463	557 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	ATP2A1	O14983	1001 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	MAFG	O15525	162 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	TPM1	P09493	284 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	BCR	P11274	1271 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	VCAM1	P19320	739 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	RPA1	P27694	616 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	INPP5B	P32019	993 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	ASIC1	P78348	528 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	TMEM119	Q4V9L6	283 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	CEP55	Q53EZ4	464 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	PRR16	Q569H4	304 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	SH3D19	Q5HYK7	790 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	UNC13D	Q70J99	1090 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	CCDC65	Q8IXS2	484 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	GRAMD1C	Q8IYS0	662 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	CCDC112	Q8NEF3	446 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	RAD54L	Q92698	747 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	HAS1	Q92839	578 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	RIT2	Q99578	217 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	TUFT1	Q9NNX1	390 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	FANCL	Q9NW38	375 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	TCEAL9	Q9UHQ7	104 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	DNM3	Q9UQ16	869 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	ZHX2	Q9Y6X8	837 aa		11.1	□□□□□ -0.63
TRIM16-222	ENST00000581224	ASTN2	O75129	1339 aa	Predicted RBP	11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	PP2D1	A8MPX8	630 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	AP5Z1	O43299	807 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	CCP110	O43303	1012 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	STAM2	O75886	525 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	ZNF18	P17022	549 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	BMP6	P22004	513 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	EEF1G	P26641	437 aa	Known RBP	11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	CDC25A	P30304	524 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	FMR1	Q06787	632 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	PDE4D	Q08499	809 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	GRB10	Q13322	594 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	MTMR2	Q13614	643 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	KMT5B	Q4FZB7	885 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	KIAA1755	Q5JYT7	1200 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	CCDC186	Q7Z3E2	898 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	FCHSD1	Q86WN1	690 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	CDAN1	Q8IWY9	1227 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	MB21D1	Q8N884	522 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	SPC24	Q8NBT2	197 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	ETNPPL	Q8TBG4	499 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	MMTAG2	Q9BU76	263 aa	Known RBP	11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	XPO4	Q9C0E2	1151 aa	Known RBP	11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	EMILIN3	Q9NT22	766 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	ABT1	Q9ULW3	272 aa	Known RBP	11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	SCAF8	Q9UPN6	1271 aa	Known RBP	11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	PASK	Q96RG2	1323 aa		11.09	□□□□□ -0.63
TRIM16-222	ENST00000581224	LRRC10B	A6NIK2	292 aa		11.08	□□□□□ -0.64
TRIM16-222	ENST00000581224		B4DLN1	442 aa		11.08	□□□□□ -0.64
TRIM16-222	ENST00000581224	ADM5	C9JUS6	153 aa		11.08	□□□□□ -0.64
TRIM16-222	ENST00000581224	MEIS1	O00470	390 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms