RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 CALM3P0DP25 149 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 RPS6KB1P23443 525 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 MRPS9P82933 396 aaKnown RBP14.53□□□□□ -0.08
CBX1-206ENST00000581003 SP2Q02086 613 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 KRT32Q14532 448 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 TTLL4Q14679 1199 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 SHHQ15465 462 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 RTN1Q16799 776 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 WWC2Q6AWC2 1192 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 HEATR3Q7Z4Q2 680 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 BRF1Q92994 677 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 IWS1Q96ST2 819 aa14.53□□□□□ -0.08
CBX1-206ENST00000581003 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
CBX1-206ENST00000581003 SEC63Q9UGP8 760 aaKnown RBP14.53□□□□□ -0.08
CBX1-206ENST00000581003 DDX41Q9UJV9 622 aaKnown RBP14.53□□□□□ -0.08
CBX1-206ENST00000581003 FRMPD4Q14CM0 1322 aa14.52□□□□□ -0.08
CBX1-206ENST00000581003 A6NJR5 290 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 DCDC2CA8MYV0 355 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 REC8O95072 547 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 CD4P01730 458 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 MMP3P08254 477 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 RAG1P15918 1043 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 CASTP20810 708 aaKnown RBP14.52□□□□□ -0.09
CBX1-206ENST00000581003 ADD1P35611 737 aaKnown RBP14.52□□□□□ -0.09
CBX1-206ENST00000581003 CHMP4BP1P59074 171 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 VSIG10LQ86VR7 867 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 TOX2Q96NM4 488 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 MPHOSPH6Q99547 160 aaKnown RBP14.52□□□□□ -0.09
CBX1-206ENST00000581003 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 TRMT13Q9NUP7 481 aaKnown RBP14.52□□□□□ -0.09
CBX1-206ENST00000581003 RTEL1Q9NZ71 1219 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 MRVI1Q9Y6F6 885 aa14.52□□□□□ -0.09
CBX1-206ENST00000581003 KIAA1217Q5T5P2 1943 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 A0A1W2PPC1 479 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 DTNBO60941 627 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 EIF3JO75822 258 aaKnown RBP14.51□□□□□ -0.09
CBX1-206ENST00000581003 ZNF286BP0CG31 522 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 UBA1P22314 1058 aaKnown RBP14.51□□□□□ -0.09
CBX1-206ENST00000581003 SMARCA1P28370 1054 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 CYP2C18P33260 490 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 GNAQP50148 359 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 CPT1AP50416 773 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 SEMA3FQ13275 785 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 BLOC1S2Q6QNY1 142 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 PGBD1Q96JS3 809 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 USP26Q9BXU7 913 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 UPF3BQ9BZI7 483 aaKnown RBP14.51□□□□□ -0.09
CBX1-206ENST00000581003 MAF1Q9H063 256 aa14.51□□□□□ -0.09
CBX1-206ENST00000581003 LAMA2P24043 3122 aaKnown RBP14.51□□□□□ -0.09
CBX1-206ENST00000581003 B4DLN1 442 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 NKRFO15226 690 aaKnown RBP eCLIP14.5□□□□□ -0.091e-8■■□□□ 11.5
CBX1-206ENST00000581003 ZEB2O60315 1214 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 GH1P01241 217 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 CYP2C9P11712 490 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 CCND2P30279 289 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 MRPL12P52815 198 aaKnown RBP14.5□□□□□ -0.09
CBX1-206ENST00000581003 FGD1P98174 961 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 TOB2Q14106 344 aaPredicted RBP14.5□□□□□ -0.09
CBX1-206ENST00000581003 NBPF20Q3BBV1 942 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 FAM47CQ5HY64 1035 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 SYNE3Q6ZMZ3 975 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 Q7L0L9 218 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 SMARCC2Q8TAQ2 1214 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 KAT2BQ92831 832 aa14.5□□□□□ -0.09
CBX1-206ENST00000581003 MTG1Q9BT17 334 aaPredicted RBP14.5□□□□□ -0.09
CBX1-206ENST00000581003 ALDH8A1Q9H2A2 487 aaPredicted RBP14.5□□□□□ -0.09
CBX1-206ENST00000581003 NCOA5Q9HCD5 579 aaKnown RBP14.5□□□□□ -0.09
CBX1-206ENST00000581003 V9GY48 417 aaPredicted RBP14.5□□□□□ -0.09
CBX1-206ENST00000581003 STXBP3O00186 592 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 CABYRO75952 493 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 GGPS1O95749 300 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 TIMP1P01033 207 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 HMGB1P09429 215 aaKnown RBP14.49□□□□□ -0.09
CBX1-206ENST00000581003 ACRP10323 421 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 CSF2RAP15509 400 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 METAP2P50579 478 aaKnown RBP eCLIP14.49□□□□□ -0.09
CBX1-206ENST00000581003 HSDL1Q3SXM5 330 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 ERICH6BQ5W0A0 696 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 C16orf59Q7L2K0 433 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 PHKBQ93100 1093 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 WNT8AQ9H1J5 351 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 PSTPIP2Q9H939 334 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 POLR3EQ9NVU0 708 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 RBM28Q9NW13 759 aaKnown RBP14.49□□□□□ -0.09
CBX1-206ENST00000581003 TMEM260Q9NX78 707 aa14.49□□□□□ -0.09
CBX1-206ENST00000581003 MAP3K20Q9NYL2 800 aaKnown RBP14.49□□□□□ -0.09
CBX1-206ENST00000581003 MROH7Q68CQ1 1323 aa14.48□□□□□ -0.09
CBX1-206ENST00000581003 PIK3CDO00329 1044 aa14.48□□□□□ -0.09
CBX1-206ENST00000581003 CCL23P55773 120 aa14.48□□□□□ -0.09
CBX1-206ENST00000581003 CCT2P78371 535 aaKnown RBP14.48□□□□□ -0.09
CBX1-206ENST00000581003 FPGSQ05932 587 aa14.48□□□□□ -0.09
CBX1-206ENST00000581003 HIC1Q14526 733 aa14.48□□□□□ -0.09
CBX1-206ENST00000581003 LRIT3Q3SXY7 679 aa14.48□□□□□ -0.09
CBX1-206ENST00000581003 FAM109BQ6ICB4 259 aaPredicted RBP14.48□□□□□ -0.09
CBX1-206ENST00000581003 INPP4AQ96PE3 977 aaPredicted RBP14.48□□□□□ -0.09
CBX1-206ENST00000581003 CTAGE1Q96RT6 745 aa14.48□□□□□ -0.09
CBX1-206ENST00000581003 NOC4LQ9BVI4 516 aaKnown RBP14.48□□□□□ -0.09
CBX1-206ENST00000581003 AGXT2Q9BYV1 514 aa14.48□□□□□ -0.09
CBX1-206ENST00000581003 NID2Q14112 1375 aa14.47□□□□□ -0.09
CBX1-206ENST00000581003 DOCK5Q9H7D0 1870 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms