RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 THSD7BQ9C0I4 1608 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 POTEMA6NI47 508 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 BTBD19C9JJ37 291 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 POLR2DO15514 142 aaKnown RBP14.84□□□□□ -0.03
CTC1-203ENST00000578240 HUNKP57058 714 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 NSMFQ6X4W1 530 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 KRBA2Q6ZNG9 492 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 RNF207Q6ZRF8 634 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 RIOX2Q8IUF8 465 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 PDILTQ8N807 584 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 MB21D1Q8N884 522 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 TAAR1Q96RJ0 339 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 UIMC1Q96RL1 719 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 PTPN18Q99952 460 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 SPATC1LQ9H0A9 340 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 ACAD9Q9H845 621 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 RBPJLQ9UBG7 517 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 CCL15-CCL14A0A0B4J2E2 113 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 CYP2C8P10632 490 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 TXKP42681 527 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 GTF2A2P52657 109 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 MRPS9P82933 396 aaKnown RBP14.84□□□□□ -0.03
CTC1-203ENST00000578240 MAP2K1Q02750 393 aaPredicted RBP14.84□□□□□ -0.03
CTC1-203ENST00000578240 BAATQ14032 418 aaPredicted RBP14.84□□□□□ -0.03
CTC1-203ENST00000578240 PLS1Q14651 629 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 CCL15Q16663 113 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 TKFCQ3LXA3 575 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 PRR16Q569H4 304 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 NAALADL2Q58DX5 795 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 FAM43AQ8N2R8 423 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 SAMD3Q8N6K7 520 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 ZFP91Q96JP5 570 aaPredicted RBP14.84□□□□□ -0.03
CTC1-203ENST00000578240 NAP1L4Q99733 375 aaKnown RBP14.84□□□□□ -0.03
CTC1-203ENST00000578240 FAM13BQ9NYF5 915 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 MAP3K20Q9NYL2 800 aaKnown RBP14.84□□□□□ -0.03
CTC1-203ENST00000578240 CYP39A1Q9NYL5 469 aa14.84□□□□□ -0.03
CTC1-203ENST00000578240 A0A087WWV3 80 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.83□□□□□ -0.04
CTC1-203ENST00000578240 MSH4O15457 936 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 CETPP11597 493 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 TECP42680 631 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 MDM2Q00987 491 aaPredicted RBP14.83□□□□□ -0.04
CTC1-203ENST00000578240 KARSQ15046 597 aaKnown RBP14.83□□□□□ -0.04
CTC1-203ENST00000578240 PDXDC2PQ6P474 469 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 PAGR1Q9BTK6 254 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 MOV10L1Q9BXT6 1211 aaKnown RBP14.83□□□□□ -0.04
CTC1-203ENST00000578240 PANK2Q9BZ23 570 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 CCSER1Q9C0I3 900 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 PXMP2Q9NR77 195 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 SERTAD1Q9UHV2 236 aa14.83□□□□□ -0.04
CTC1-203ENST00000578240 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 ITGB5P18084 799 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 PGM5Q15124 567 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 Q3C1V9 767 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
CTC1-203ENST00000578240 SH3RF1Q7Z6J0 888 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 GRAMD1CQ8IYS0 662 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 MTRQ99707 1265 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 NUDT12Q9BQG2 462 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 PDCD2LQ9BRP1 358 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 TTC12Q9H892 705 aaPredicted RBP14.82□□□□□ -0.04
CTC1-203ENST00000578240 WBP1LQ9NX94 342 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 VAV3Q9UKW4 847 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 SLC45A1Q9Y2W3 748 aa14.82□□□□□ -0.04
CTC1-203ENST00000578240 PDHXO00330 501 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 TBX3O15119 743 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 EIF2AK2P19525 551 aaKnown RBP14.81□□□□□ -0.04
CTC1-203ENST00000578240 CTCFP49711 727 aaPredicted RBP14.81□□□□□ -0.04
CTC1-203ENST00000578240 PCNX4Q63HM2 1172 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 ANKRD23Q86SG2 305 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 CHST13Q8NET6 341 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 DHX58Q96C10 678 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 AK8Q96MA6 479 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 DISC1Q9NRI5 854 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 ADGRA2Q96PE1 1338 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 TESPA1A2RU30 521 aaPredicted RBP14.81□□□□□ -0.04
CTC1-203ENST00000578240 MEIS1O00470 390 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 CTAGE5O15320 804 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 AOC2O75106 756 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 LETM1O95202 739 aaPredicted RBP14.81□□□□□ -0.04
CTC1-203ENST00000578240 OSBPP22059 807 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 MAP2K2P36507 400 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 PABPC4Q13310 644 aaKnown RBP eCLIP14.81□□□□□ -0.04
CTC1-203ENST00000578240 PNOCQ13519 176 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 CEP55Q53EZ4 464 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 COL13A1Q5TAT6 717 aaPredicted RBP14.81□□□□□ -0.04
CTC1-203ENST00000578240 FGD4Q96M96 766 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 RMDN3Q96TC7 470 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 BEGAINQ9BUH8 593 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 RBSNQ9H1K0 784 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 EHMT1Q9H9B1 1298 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 RABGAP1Q9Y3P9 1069 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 UBIAD1Q9Y5Z9 338 aa14.81□□□□□ -0.04
CTC1-203ENST00000578240 FAM155AB1AL88 458 aaPredicted RBP14.8□□□□□ -0.04
CTC1-203ENST00000578240 SLC10A3P09131 477 aa14.8□□□□□ -0.04
CTC1-203ENST00000578240 ARP10275 920 aa14.8□□□□□ -0.04
CTC1-203ENST00000578240 ERCC3P19447 782 aa14.8□□□□□ -0.04
CTC1-203ENST00000578240 TYRO3Q06418 890 aa14.8□□□□□ -0.04
CTC1-203ENST00000578240 GRB10Q13322 594 aa14.8□□□□□ -0.04
CTC1-203ENST00000578240 CABP7Q86V35 215 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms