RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 USP17L12C9JPN9 530 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 USP17L21D6R901 530 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 ATP2A1O14983 1001 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 UPP2O95045 317 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 SRGAP2BP0DMP2 458 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 ZNF528Q3MIS6 628 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 TMEM184AQ6ZMB5 413 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 C1orf210Q8IVY1 113 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 ZDHHC14Q8IZN3 488 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 FAM133AQ8N9E0 248 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 DBF4BQ8NFT6 615 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 DHX38Q92620 1227 aaKnown RBP7.28□□□□□ -1.24
SNX11-204ENST00000577310 NECTIN4Q96NY8 510 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 SRCIN1Q9C0H9 1055 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 TLE6Q9H808 572 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 ARHGEF10LQ9HCE6 1279 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 ERVK-5Q9HDB9 667 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 GPR108Q9NPR9 543 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 PDGFCQ9NRA1 345 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 TSHZ2Q9NRE2 1034 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 FBXO28Q9NVF7 368 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 FBXO40Q9UH90 709 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 PATJQ8NI35 1801 aa7.28□□□□□ -1.24
SNX11-204ENST00000577310 ANKRD17O75179 2603 aaKnown RBP7.27□□□□□ -1.25
SNX11-204ENST00000577310 CFAP46Q8IYW2 2715 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 C2CD4DB7Z1M9 353 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 CIAO1O76071 339 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 ASGR2P07307 311 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 HOXB8P17481 243 aaPredicted RBP7.27□□□□□ -1.25
SNX11-204ENST00000577310 SP100P23497 879 aaPredicted RBP7.27□□□□□ -1.25
SNX11-204ENST00000577310 DNAJB1P25685 340 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 ADORA1P30542 326 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 RFX5P48382 616 aaPredicted RBP7.27□□□□□ -1.25
SNX11-204ENST00000577310 MBTPS1Q14703 1052 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 PLEKHG4Q58EX7 1191 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 TMEM63BQ5T3F8 832 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 NAA16Q6N069 864 aaPredicted RBP7.27□□□□□ -1.25
SNX11-204ENST00000577310 TRAF7Q6Q0C0 670 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 TBC1D9Q6ZT07 1266 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 KIAA1211Q6ZU35 1233 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 TMEM179Q6ZVK1 233 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 RBM23Q86U06 439 aaKnown RBP7.27□□□□□ -1.25
SNX11-204ENST00000577310 SIX5Q8N196 739 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 PLCD3Q8N3E9 789 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 CHST13Q8NET6 341 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 SPPL3Q8TCT6 385 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 CDCA3Q99618 268 aaPredicted RBP7.27□□□□□ -1.25
SNX11-204ENST00000577310 IFIH1Q9BYX4 1025 aaKnown RBP7.27□□□□□ -1.25
SNX11-204ENST00000577310 EPC1Q9H2F5 836 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 VTA1Q9NP79 307 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 PARD6AQ9NPB6 346 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 HMG20BQ9P0W2 317 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 PCDHGA2Q9Y5H1 932 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 CELSR3Q9NYQ7 3312 aa7.27□□□□□ -1.25
SNX11-204ENST00000577310 COL12A1Q99715 3063 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.26□□□□□ -1.25
SNX11-204ENST00000577310 A6NJR5 290 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 STK25O00506 426 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 MPHOSPH10O00566 681 aaKnown RBP7.26□□□□□ -1.25
SNX11-204ENST00000577310 TBC1D4O60343 1298 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 LRP3O75074 770 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 CSPG5O95196 566 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 PLCD1P51178 756 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 CNTN2Q02246 1040 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 CCDC27Q2M243 656 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 GDF6Q6KF10 455 aaPredicted RBP7.26□□□□□ -1.25
SNX11-204ENST00000577310 SYCE2Q6PIF2 218 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 SIAH1Q8IUQ4 282 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 SPATA5Q8NB90 893 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 PPP1R13LQ8WUF5 828 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 LRP2BPQ9P2M1 347 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 LIMD1Q9UGP4 676 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 FBXL21Q9UKT6 434 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 SMG5Q9UPR3 1016 aaKnown RBP7.26□□□□□ -1.25
SNX11-204ENST00000577310 LCTP09848 1927 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 SHROOM3Q8TF72 1996 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 DENND4AQ7Z401 1863 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 RAD50Q92878 1312 aa7.26□□□□□ -1.25
SNX11-204ENST00000577310 DOPEY1Q5JWR5 2465 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 FOXD2O60548 495 aaPredicted RBP7.25□□□□□ -1.25
SNX11-204ENST00000577310 IGSF3O75054 1194 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 KCNA4P22459 653 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 RBM25P49756 843 aaKnown RBP7.25□□□□□ -1.25
SNX11-204ENST00000577310 TDGQ13569 410 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 KCNC3Q14003 757 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 MVPQ14764 893 aaKnown RBP7.25□□□□□ -1.25
SNX11-204ENST00000577310 DUSP6Q16828 381 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 ZNF618Q5T7W0 954 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 ANKRD54Q6NXT1 300 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 CERS3Q8IU89 383 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 FBXO16Q8IX29 292 aaPredicted RBP7.25□□□□□ -1.25
SNX11-204ENST00000577310 VN1R2Q8NFZ6 395 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 ADAM32Q8TC27 787 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 POF1BQ8WVV4 589 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 ATRIPQ8WXE1 791 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 HNRNPABQ99729 332 aaKnown RBP7.25□□□□□ -1.25
SNX11-204ENST00000577310 TMEM121BQ9BXQ6 578 aaPredicted RBP7.25□□□□□ -1.25
SNX11-204ENST00000577310 WDR11Q9BZH6 1224 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 CACNA2D2Q9NY47 1150 aa7.25□□□□□ -1.25
SNX11-204ENST00000577310 DLGAP2Q9P1A6 1054 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms