RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SLFN12Q8IYM2 578 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 DDX12PQ92771 950 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 EEF2KMTQ96G04 330 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 DUSP9Q99956 384 aaKnown RBP15.7■□□□□ 0.1
VPS33B-208ENST00000574755 NAA15Q9BXJ9 866 aaKnown RBP15.7■□□□□ 0.1
VPS33B-208ENST00000574755 TGFB2P61812 414 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 ETF1P62495 437 aaKnown RBP15.69■□□□□ 0.1
VPS33B-208ENST00000574755 ZYXQ15942 572 aaKnown RBP15.69■□□□□ 0.1
VPS33B-208ENST00000574755 COBLL1Q53SF7 1204 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 CRYGNQ8WXF5 182 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 MBOAT7Q96N66 472 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.69■□□□□ 0.1
VPS33B-208ENST00000574755 SMCHD1A6NHR9 2005 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 SOWAHDA6NJG2 315 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 WNT10BO00744 389 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 TBC1D12O60347 775 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 HOXA13P31271 388 aaPredicted RBP15.69■□□□□ 0.1
VPS33B-208ENST00000574755 TRIM14Q14142 442 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 NBPF9Q3BBW0 867 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 JDP2Q8WYK2 163 aa15.69■□□□□ 0.1
VPS33B-208ENST00000574755 GOLGA6L9A6NEM1 432 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 LGALS16A8MUM7 142 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 OPLAHO14841 1288 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 PRKCSHP14314 528 aaPredicted RBP15.68■□□□□ 0.1
VPS33B-208ENST00000574755 SREBF1P36956 1147 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 MMP14P50281 582 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 DALRD3Q5D0E6 543 aaKnown RBP15.68■□□□□ 0.1
VPS33B-208ENST00000574755 HYIQ5T013 277 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 CIAPIN1Q6FI81 312 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 FAM114A1Q8IWE2 563 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 CCDC51Q96ER9 411 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 DESI2Q9BSY9 194 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 TAOK3Q9H2K8 898 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 KIAA1024Q9UPX6 916 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 SSBP05455 408 aaKnown RBP eCLIP15.68■□□□□ 0.1
VPS33B-208ENST00000574755 CAP2P40123 477 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 TRAF1Q13077 416 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 MTF1Q14872 753 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 MB21D1Q8N884 522 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 KIFC2Q96AC6 838 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 TUBGCP2Q9BSJ2 902 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 MYOZ2Q9NPC6 264 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 DNAI1Q9UI46 699 aa15.68■□□□□ 0.1
VPS33B-208ENST00000574755 POTEB3A0JP26 581 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 POTECB2RU33 542 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 STAT3P40763 770 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 HSP90AA2PQ14568 343 aaPredicted RBP15.67■□□□□ 0.1
VPS33B-208ENST00000574755 Q4G0T1 1027 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 POTEBQ6S5H4 581 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 ETNPPLQ8TBG4 499 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 CNOT6LQ96LI5 555 aaKnown RBP15.67■□□□□ 0.1
VPS33B-208ENST00000574755 SH2D4AQ9H788 454 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 VCPKMTQ9H867 229 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 ABHD10Q9NUJ1 306 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 E9PMD0 336 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 FAM86B1E9PN63 330 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 TBX3O15119 743 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 RRP9O43818 475 aaKnown RBP15.67■□□□□ 0.1
VPS33B-208ENST00000574755 CCDC175P0C221 793 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 FAM86B2P0C5J1 330 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 HAUS3Q68CZ6 603 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 CENPPQ6IPU0 288 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 CCDC174Q6PII3 467 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 TRIM65Q6PJ69 517 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 SAMD1Q6SPF0 538 aaPredicted RBP15.67■□□□□ 0.1
VPS33B-208ENST00000574755 ZNF710Q8N1W2 664 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 CHURC1Q8WUH1 139 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 SEMA6BQ9H3T3 888 aa15.67■□□□□ 0.1
VPS33B-208ENST00000574755 BMP2KQ9NSY1 1161 aaPredicted RBP15.67■□□□□ 0.1
VPS33B-208ENST00000574755 PPP1R1BQ9UD71 204 aaPredicted RBP15.67■□□□□ 0.1
VPS33B-208ENST00000574755 FER1L6Q2WGJ9 1857 aa15.66■□□□□ 0.1
VPS33B-208ENST00000574755 PHLPP2Q6ZVD8 1323 aa15.66■□□□□ 0.1
VPS33B-208ENST00000574755 SHTN1A0MZ66 631 aa15.66■□□□□ 0.1
VPS33B-208ENST00000574755 B4DLN1 442 aa15.66■□□□□ 0.1
VPS33B-208ENST00000574755 PIK3CDO00329 1044 aa15.66■□□□□ 0.1
VPS33B-208ENST00000574755 CFBP00751 764 aa15.66■□□□□ 0.1
VPS33B-208ENST00000574755 PSMD2Q13200 908 aa15.66■□□□□ 0.1
VPS33B-208ENST00000574755 RAD9BQ6WBX8 426 aa15.66■□□□□ 0.1
VPS33B-208ENST00000574755 GUF1Q8N442 669 aaKnown RBP15.66■□□□□ 0.1
VPS33B-208ENST00000574755 ZBED3Q96IU2 234 aaPredicted RBP15.66■□□□□ 0.1
VPS33B-208ENST00000574755 SCAF8Q9UPN6 1271 aaKnown RBP15.66■□□□□ 0.1
VPS33B-208ENST00000574755 A0A1W2PQC6 194 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 ASNSP08243 561 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 POLD1P28340 1107 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 ZNF76P36508 570 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 MTIF2P46199 727 aaKnown RBP15.65■□□□□ 0.1
VPS33B-208ENST00000574755 DNM2P50570 870 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 ZNF507Q8TCN5 953 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 LENG9Q96B70 501 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 RNF225M0QZC1 329 aaPredicted RBP15.65■□□□□ 0.1
VPS33B-208ENST00000574755 MED24O75448 989 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 PLA2G4BP0C869 781 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 KRT9P35527 623 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 EHHADHQ08426 723 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 SPIRE1Q08AE8 756 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 NCAPH2Q6IBW4 605 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 ERMNQ8TAM6 284 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 DNAJC19Q96DA6 116 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 GLIS2Q9BZE0 524 aaPredicted RBP15.65■□□□□ 0.1
VPS33B-208ENST00000574755 RANBP17Q9H2T7 1088 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms