RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 KCNMB3Q9NPA1 279 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 PAXBP1Q9Y5B6 917 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 OPLAHO14841 1288 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 FOSP01100 380 aaPredicted RBP11.7□□□□□ -0.54
USP43-205ENST00000574408 CCNE1P24864 410 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 CAP2P40123 477 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 FCHSD1Q86WN1 690 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 CSGALNACT2Q8N6G5 542 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 P2RX5Q93086 422 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 ZBED3Q96IU2 234 aaPredicted RBP11.7□□□□□ -0.54
USP43-205ENST00000574408 GLIS2Q9BZE0 524 aaPredicted RBP11.7□□□□□ -0.54
USP43-205ENST00000574408 VCPKMTQ9H867 229 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 CYP3A7-CYP3A51PA0A087WV96 503 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 NFKBIEO00221 500 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 CCP110O43303 1012 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 TBC1D12O60347 775 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 STX10O60499 249 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 CYP3A7P24462 503 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.54
USP43-205ENST00000574408 STAT3P40763 770 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 MCTP2Q6DN12 878 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 UNC13DQ70J99 1090 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 KIAA0895Q8NCT3 520 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 ZFP91Q96JP5 570 aaPredicted RBP11.69□□□□□ -0.54
USP43-205ENST00000574408 MAGEC2Q9UBF1 373 aaPredicted RBP11.69□□□□□ -0.54
USP43-205ENST00000574408 KIF2AO00139 706 aaPredicted RBP11.69□□□□□ -0.54
USP43-205ENST00000574408 RASA3Q14644 834 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 CRYGNQ8WXF5 182 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 DDX12PQ92771 950 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 MBOAT7Q96N66 472 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 DUSP9Q99956 384 aaKnown RBP11.69□□□□□ -0.54
USP43-205ENST00000574408 THAP9Q9H5L6 903 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 BCS1LQ9Y276 419 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 SMCHD1A6NHR9 2005 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 BICDL2A1A5D9 508 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 CASP14P31944 242 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 SREBF1P36956 1147 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 MMP14P50281 582 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 UBXN1Q04323 297 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 MOXD1Q6UVY6 613 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 KIF18AQ8NI77 898 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 CHURC1Q8WUH1 139 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 BBXQ8WY36 941 aaPredicted RBP11.69□□□□□ -0.54
USP43-205ENST00000574408 GTPBP4Q9BZE4 634 aaKnown RBP11.69□□□□□ -0.54
USP43-205ENST00000574408 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 KIAA1024Q9UPX6 916 aa11.69□□□□□ -0.54
USP43-205ENST00000574408 KIF13BQ9NQT8 1826 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 PVALEFA0A1B0GWK0 134 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 POTECB2RU33 542 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 MFAP3LO75121 409 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 EGFRP00533 1210 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 CFBP00751 764 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 TPM1P09493 284 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 EEF1GP26641 437 aaKnown RBP11.68□□□□□ -0.54
USP43-205ENST00000574408 TNIP1Q15025 636 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 ANKRD40Q6AI12 368 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 SLFN12Q8IYM2 578 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 FEZ1Q99689 392 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 LRRC27Q9C0I9 530 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 NT5C3AQ9H0P0 336 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 FBXO28Q9NVF7 368 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 KDM3AQ9Y4C1 1321 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 E9PMD0 336 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 FAM86B1E9PN63 330 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 GYPCP04921 128 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 ASNSP08243 561 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 FAM86B2P0C5J1 330 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 ZNF76P36508 570 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 PPP1R2P41236 205 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 SKIDA1Q1XH10 827 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 SYT10Q6XYQ8 523 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 PANX2Q96RD6 677 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 PGAP2Q9UHJ9 254 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 PPP2R2CQ9Y2T4 447 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.68□□□□□ -0.54
USP43-205ENST00000574408 ITIH6Q6UXX5 1313 aa11.68□□□□□ -0.54
USP43-205ENST00000574408 ZSCAN12O43309 604 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 FXR1P51114 621 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP43-205ENST00000574408 TOGARAM2Q6ZUX3 1019 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 ETNPPLQ8TBG4 499 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
USP43-205ENST00000574408 TBC1D5Q92609 795 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 TRAF1Q13077 416 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 NCAPH2Q6IBW4 605 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 CNGA4Q8IV77 575 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 FBXO41Q8TF61 875 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 LENG9Q96B70 501 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 DESI2Q9BSY9 194 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 ZNF341Q9BYN7 854 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 SOWAHDA6NJG2 315 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 LGALS16A8MUM7 142 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 MTF1Q14872 753 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 Q4G0T1 1027 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 HYIQ5T013 277 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 REXO1L1PQ8IX06 675 aa11.67□□□□□ -0.54
USP43-205ENST00000574408 CYP2W1Q8TAV3 490 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms