RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ERO1BQ86YB8 467 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 CCDC39Q9UFE4 941 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 A0A0G2JMZ2 1700 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 ZNF76P36508 570 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 PPATQ06203 517 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 SYTL5Q8TDW5 730 aaPredicted RBP12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 SNX29Q8TEQ0 813 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 RRAGCQ9HB90 399 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 RNF146Q9NTX7 359 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 A0A0G2JLL6 359 aaPredicted RBP12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 ADCY5O95622 1261 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 RPS6P62753 249 aaKnown RBP12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 SPIRE1Q08AE8 756 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 PDIA5Q14554 519 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 PRRT2Q7Z6L0 340 aaPredicted RBP12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 GHRHRQ02643 423 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 NSMFQ6X4W1 530 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 KCNK18Q7Z418 384 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 SMYD4Q8IYR2 804 aaPredicted RBP12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 OPTNQ96CV9 577 aa12.31□□□□□ -0.44
PDXDC1-216ENST00000569715 RPTORQ8N122 1335 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 GJA5P36382 358 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 TEX2Q8IWB9 1127 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 RAB34Q9BZG1 259 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 NAT10Q9H0A0 1025 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 BLOC1S4Q9NUP1 217 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 LCTP09848 1927 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 SMC2O95347 1197 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 FDX1P10109 184 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 PLS1Q14651 629 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 NCAPHQ15003 741 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 MCF2L2Q86YR7 1114 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 CCDC34Q96HJ3 373 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 TAAR1Q96RJ0 339 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 BPIFA3Q9BQP9 254 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 KBTBD4Q9NVX7 518 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 BECN2A8MW95 431 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 ARMC9Q7Z3E5 817 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 CALML4Q96GE6 196 aa12.3□□□□□ -0.44
PDXDC1-216ENST00000569715 DHX8Q14562 1220 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 KRT79Q5XKE5 535 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 SLFN12Q8IYM2 578 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 GOLGA6L19H0YKK7 550 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 PPIL2Q13356 520 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 MOGSQ13724 837 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 TMEM119Q4V9L6 283 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 CEP55Q53EZ4 464 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 LDLRAD1Q5T700 205 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 RNF207Q6ZRF8 634 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 PLA2G4DQ86XP0 818 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 KCNH4Q9UQ05 1017 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 TBX3O15119 743 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 ARP10275 920 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 EIF2AK2P19525 551 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 OAZ1P54368 228 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 BAATQ14032 418 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 TRIML1Q8N9V2 468 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 GSDMAQ96QA5 445 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 TEX13BQ9BXU2 312 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 EHMT1Q9H9B1 1298 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 HOXC10Q9NYD6 342 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 BTBD7Q9P203 1132 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 MYPNQ86TC9 1320 aa12.29□□□□□ -0.44
PDXDC1-216ENST00000569715 POTEB3A0JP26 581 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 ITGB5P18084 799 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 MCM6Q14566 821 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 NCAPH2Q6IBW4 605 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 POTEBQ6S5H4 581 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 CDK5RAP3Q96JB5 506 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 MED15Q96RN5 788 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 HSD3B7Q9H2F3 369 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 FRMPD4Q14CM0 1322 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 ATP2A1O14983 1001 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 RPN1P04843 607 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 CCT6AP40227 531 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 PROCA1Q8NCQ7 364 aaPredicted RBP12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 ZNF526Q8TF50 670 aaPredicted RBP12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 NMRK2Q9NPI5 230 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 CXCL11O14625 94 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 KLRC4O43908 158 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 MED24O75448 989 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 MRPS9P82933 396 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 CUEDC2Q9H467 287 aa12.28□□□□□ -0.44
PDXDC1-216ENST00000569715 EML1O00423 815 aa12.27□□□□□ -0.44
PDXDC1-216ENST00000569715 MEIS1O00470 390 aa12.27□□□□□ -0.44
PDXDC1-216ENST00000569715 ASCC2Q9H1I8 757 aaPredicted RBP12.27□□□□□ -0.44
PDXDC1-216ENST00000569715 HOXA7P31268 230 aaPredicted RBP12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 PGM5Q15124 567 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 MLKLQ8NB16 471 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 LARP4BQ92615 738 aaKnown RBP12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 RAD54LQ92698 747 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 RMDN3Q96TC7 470 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 MXRA8Q9BRK3 442 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms