RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 SSH3Q8TE77 659 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 SREK1Q8WXA9 508 aaKnown RBP7.52□□□□□ -1.21
LINC00556-201ENST00000569603 NSUN4Q96CB9 384 aaKnown RBP7.52□□□□□ -1.21
LINC00556-201ENST00000569603 MEGF10Q96KG7 1140 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 SRRDQ9UH36 339 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 HDAC5Q9UQL6 1122 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 SLC45A1Q9Y2W3 748 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 PLXNB2O15031 1838 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 ALPK3Q96L96 1907 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 CTNND1O60716 968 aaKnown RBP7.51□□□□□ -1.21
LINC00556-201ENST00000569603 DEAF1O75398 565 aaPredicted RBP7.51□□□□□ -1.21
LINC00556-201ENST00000569603 SASH3O75995 380 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 CYP2C8P10632 490 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 BTDP43251 543 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 ARSDP51689 593 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 PRMT2P55345 433 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 GPLD1P80108 840 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 OS9Q13438 667 aaPredicted RBP7.51□□□□□ -1.21
LINC00556-201ENST00000569603 MVPQ14764 893 aaKnown RBP7.51□□□□□ -1.21
LINC00556-201ENST00000569603 SLC9C1Q4G0N8 1177 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 ERICH6BQ5W0A0 696 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 METTL16Q86W50 562 aaKnown RBP7.51□□□□□ -1.21
LINC00556-201ENST00000569603 ANKMY2Q8IV38 441 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 DTWD1Q8N5C7 304 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 SPATA5Q8NB90 893 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 SH3TC2Q8TF17 1288 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 KRTAP4-12Q9BQ66 201 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 PPP1R12CQ9BZL4 782 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 GPR108Q9NPR9 543 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.51□□□□□ -1.21
LINC00556-201ENST00000569603 CPA4Q9UI42 421 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 USP20Q9Y2K6 914 aa7.51□□□□□ -1.21
LINC00556-201ENST00000569603 DDX60LQ5H9U9 1706 aaKnown RBP7.51□□□□□ -1.21
LINC00556-201ENST00000569603 MUC3AQ02505 3323 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 FAM196BA6NMK8 535 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 MAP4K4O95819 1239 aaPredicted RBP7.5□□□□□ -1.21
LINC00556-201ENST00000569603 GNAI2P04899 355 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 RARAP10276 462 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 RLBP1P12271 317 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 PSMC4P43686 418 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 ARHGEF6Q15052 776 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 HABP4Q5JVS0 413 aaKnown RBP7.5□□□□□ -1.21
LINC00556-201ENST00000569603 ELMSAN1Q6PJG2 1045 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 FAM43BQ6ZT52 329 aaPredicted RBP7.5□□□□□ -1.21
LINC00556-201ENST00000569603 HFE2Q6ZVN8 426 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 ADGRA1Q86SQ6 560 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 WFDC8Q8IUA0 241 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 TMEM57Q8N5G2 664 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 ZNF512BQ96KM6 892 aaPredicted RBP7.5□□□□□ -1.21
LINC00556-201ENST00000569603 PARK7Q99497 189 aaKnown RBP7.5□□□□□ -1.21
LINC00556-201ENST00000569603 SMG9Q9H0W8 520 aaKnown RBP7.5□□□□□ -1.21
LINC00556-201ENST00000569603 PRO3102Q9H379 93 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 DNAJC18Q9H819 358 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 AKAP2Q9Y2D5 859 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 NOP58Q9Y2X3 529 aaKnown RBP7.5□□□□□ -1.21
LINC00556-201ENST00000569603 ZHX2Q9Y6X8 837 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 TTC28Q96AY4 2481 aa7.5□□□□□ -1.21
LINC00556-201ENST00000569603 MICAL2O94851 1124 aa7.49□□□□□ -1.21
LINC00556-201ENST00000569603 JAG1P78504 1218 aa7.49□□□□□ -1.21
LINC00556-201ENST00000569603 PRKCZQ05513 592 aa7.49□□□□□ -1.21
LINC00556-201ENST00000569603 PCSK7Q16549 785 aa7.49□□□□□ -1.21
LINC00556-201ENST00000569603 TREML2Q5T2D2 321 aa7.49□□□□□ -1.21
LINC00556-201ENST00000569603 CCDC84Q86UT8 332 aaPredicted RBP7.49□□□□□ -1.21
LINC00556-201ENST00000569603 DZIP1Q86YF9 867 aaKnown RBP7.49□□□□□ -1.21
LINC00556-201ENST00000569603 MICAL1Q8TDZ2 1067 aa7.49□□□□□ -1.21
LINC00556-201ENST00000569603 OSBPL5Q9H0X9 879 aaPredicted RBP7.49□□□□□ -1.21
LINC00556-201ENST00000569603 ABCF2Q9UG63 623 aa7.49□□□□□ -1.21
LINC00556-201ENST00000569603 RBM47A0AV96 593 aaKnown RBP7.48□□□□□ -1.21
LINC00556-201ENST00000569603 IPO8O15397 1037 aaKnown RBP7.48□□□□□ -1.21
LINC00556-201ENST00000569603 CYP2E1P05181 493 aaPredicted RBP7.48□□□□□ -1.21
LINC00556-201ENST00000569603 GJB1P08034 283 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 WEE1P30291 646 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 GRK4P32298 578 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 GJA8P48165 433 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 FXR1P51114 621 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00556-201ENST00000569603 ATP8B2P98198 1209 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 TNNI3KQ59H18 835 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 SND1Q7KZF4 910 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00556-201ENST00000569603 FASTKD5Q7L8L6 764 aaKnown RBP7.48□□□□□ -1.21
LINC00556-201ENST00000569603 SH3RF3Q8TEJ3 882 aaPredicted RBP7.48□□□□□ -1.21
LINC00556-201ENST00000569603 TTC9Q92623 222 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 MYO19Q96H55 970 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 SPTBN5Q9NRC6 3674 aaKnown RBP7.48□□□□□ -1.21
LINC00556-201ENST00000569603 PICK1Q9NRD5 415 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 DBNLQ9UJU6 430 aaKnown RBP7.48□□□□□ -1.21
LINC00556-201ENST00000569603 LRFN2Q9ULH4 789 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 GABRQQ9UN88 632 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 AGTPBP1Q9UPW5 1226 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 FPGT-TNNI3KV9GXZ4 949 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 MYH1P12882 1939 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 MYPNQ86TC9 1320 aa7.48□□□□□ -1.21
LINC00556-201ENST00000569603 RLFQ13129 1914 aa7.47□□□□□ -1.21
LINC00556-201ENST00000569603 TRIM75PA6NK02 468 aa7.47□□□□□ -1.21
LINC00556-201ENST00000569603 H0YGN5 161 aa7.47□□□□□ -1.21
LINC00556-201ENST00000569603 OPLAHO14841 1288 aa7.47□□□□□ -1.21
LINC00556-201ENST00000569603 UQCRFS1P1P0C7P4 283 aa7.47□□□□□ -1.21
LINC00556-201ENST00000569603 CCL5P13501 91 aa7.47□□□□□ -1.21
LINC00556-201ENST00000569603 EIF2AK2P19525 551 aaKnown RBP7.47□□□□□ -1.21
LINC00556-201ENST00000569603 CAP2P40123 477 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms