RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	VTA1	Q9NP79	307 aa		7.53	□□□□□ -1.2
BBS4-218	ENST00000569440	RBM47	A0AV96	593 aa	Known RBP	7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	BRD1	O95696	1058 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	GLP2R	O95838	553 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	MMP1	P03956	469 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	HOXB1	P14653	301 aa	Predicted RBP	7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	SDHB	P21912	280 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	SLC4A3	P48751	1232 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	OAZ1	P54368	228 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	TRIM71	Q2Q1W2	868 aa	Known RBP	7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	GDF6	Q6KF10	455 aa	Predicted RBP	7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	EEPD1	Q7L9B9	569 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	CCDC105	Q8IYK2	499 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	MRPL50	Q8N5N7	158 aa	Known RBP	7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	RUBCN	Q92622	972 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	MARVELD3	Q96A59	401 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	YME1L1	Q96TA2	773 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	HAUS7	Q99871	368 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	RIOK1	Q9BRS2	568 aa	Known RBP	7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	WDR11	Q9BZH6	1224 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	KANSL2	Q9H9L4	492 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	GOPC	Q9HD26	462 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	A1CF	Q9NQ94	594 aa	Known RBP	7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	SWAP70	Q9UH65	585 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	PCDHGA4	Q9Y5G9	962 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	MYH13	Q9UKX3	1938 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	PTPRC	P08575	1304 aa		7.52	□□□□□ -1.21
BBS4-218	ENST00000569440	PI15	O43692	258 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	UBTFL1	P0CB47	393 aa	Predicted RBP	7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	AR	P10275	920 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	ZAP70	P43403	619 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	MTMR3	Q13615	1198 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	CWF19L1	Q69YN2	538 aa	Known RBP	7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	DCLK2	Q8N568	766 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	DBF4B	Q8NFT6	615 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	CYP2W1	Q8TAV3	490 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	PTCD2	Q8WV60	388 aa	Known RBP	7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	CLP1	Q92989	425 aa	Known RBP	7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	CHAMP1	Q96JM3	812 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	CCDC17	Q96LX7	622 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	NUP88	Q99567	741 aa	Predicted RBP	7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	MCM9	Q9NXL9	1143 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	SORCS3	Q9UPU3	1222 aa		7.51	□□□□□ -1.21
BBS4-218	ENST00000569440	CYP2D6	P10635	497 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	AOC1	P19801	751 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	CTNNB1	P35222	781 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	PLEKHG4	Q58EX7	1191 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	BRDT	Q58F21	947 aa	Predicted RBP	7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	ZNF618	Q5T7W0	954 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	TMED8	Q6PL24	325 aa	Predicted RBP	7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	ADGRD2	Q7Z7M1	963 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	ZBTB33	Q86T24	672 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	FIBCD1	Q8N539	461 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	DTWD2	Q8NBA8	298 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	OR6J1	Q8NGC5	347 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	IL17RA	Q96F46	866 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	DYNLL2	Q96FJ2	89 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	S1PR5	Q9H228	398 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	ACAD9	Q9H845	621 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	BARX2	Q9UMQ3	279 aa	Predicted RBP	7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	PLAGL2	Q9UPG8	496 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	COG6	Q9Y2V7	657 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	RWDD3	Q9Y3V2	267 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440		R4GN57	208 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	USP24	Q9UPU5	2620 aa		7.5	□□□□□ -1.21
BBS4-218	ENST00000569440	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	7.49	□□□□□ -1.21
BBS4-218	ENST00000569440		F5H6K3	240 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	NUDT7	P0C024	238 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	NPR3	P17342	541 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	DNAJB1	P25685	340 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	EMP3	P54852	163 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	KLRC3	Q07444	240 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	PTK7	Q13308	1070 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	CAMK2B	Q13554	666 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	TTC39A	Q5SRH9	613 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	POTEG	Q6S5H5	508 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	OXER1	Q8TDS5	423 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	ATP8B4	Q8TF62	1192 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	KAT2B	Q92831	832 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	WNT8B	Q93098	351 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	PPP2R3C	Q969Q6	453 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	PLVAP	Q9BX97	442 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	SMOC2	Q9H3U7	446 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	HOMER2	Q9NSB8	354 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	GTF2IRD1	Q9UHL9	959 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	EMSY	Q7Z589	1322 aa		7.49	□□□□□ -1.21
BBS4-218	ENST00000569440	EP300	Q09472	2414 aa	Predicted RBP	7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	DCDC2B	A2VCK2	349 aa		7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	POTEM	A6NI47	508 aa		7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	SOBP	A7XYQ1	873 aa		7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	NKRF	O15226	690 aa	Known RBP eCLIP	7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	RAD21	O60216	631 aa		7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	IDH1	O75874	414 aa	Known RBP	7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	UPP2	O95045	317 aa		7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	NDUFB10	O96000	172 aa		7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	NRIP1	P48552	1158 aa		7.48	□□□□□ -1.21
BBS4-218	ENST00000569440	CDK8	P49336	464 aa		7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms