RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 USP5P45974 858 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 NRIP1P48552 1158 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 DYNLL1P63167 89 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 BRDTQ58F21 947 aaPredicted RBP8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 GDF6Q6KF10 455 aaPredicted RBP8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 KIAA1211Q6ZU35 1233 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 POTEDQ86YR6 584 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 CERS3Q8IU89 383 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 FBXO16Q8IX29 292 aaPredicted RBP8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 DBF4BQ8NFT6 615 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 ATP8B4Q8TF62 1192 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 P2RX5Q93086 422 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 S1PR5Q9H228 398 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 VTA1Q9NP79 307 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 NCDNQ9UBB6 729 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 PLAGL2Q9UPG8 496 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 MYH4Q9Y623 1939 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 SDK1Q7Z5N4 2213 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 ADAMTS20P59510 1910 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 ITPR1Q14643 2758 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 FSD2A1L4K1 749 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 A6NJR5 290 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 TAF4O00268 1085 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 SLC30A4O14863 429 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 KINO60870 393 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 UPP2O95045 317 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 TGM1P22735 817 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 ICA1Q05084 483 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 RALBP1Q15311 655 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 NAALADL2Q58DX5 795 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 PLEKHG4Q58EX7 1191 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 EEPD1Q7L9B9 569 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 CPXCR1Q8N123 301 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 KDF1Q8NAX2 398 aaPredicted RBP8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 MORC4Q8TE76 937 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 IL17RAQ96F46 866 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 NEK1Q96PY6 1258 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 SLF1Q9BQI6 1058 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 USP44Q9H0E7 712 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 AKAP2Q9Y2D5 859 aa8.04□□□□□ -1.12
HERPUD1-217ENST00000569429 ACACAQ13085 2346 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 DOCK8Q8NF50 2099 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 RBM47A0AV96 593 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 C2CD4DB7Z1M9 353 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 SP100P23497 879 aaPredicted RBP8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 DNAJB1P25685 340 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 OAZ1P54368 228 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 TRIM71Q2Q1W2 868 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 FAM83BQ5T0W9 1011 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 ZNF618Q5T7W0 954 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 TMEM184AQ6ZMB5 413 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 CLEC10AQ8IUN9 316 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 LURAP1LQ8IV03 231 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 PRPF38AQ8NAV1 312 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 OR6J1Q8NGC5 347 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 SPPL3Q8TCT6 385 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 RIN2Q8WYP3 895 aaPredicted RBP8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 SECISBP2LQ93073 1101 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 RC3H2Q9HBD1 1191 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 GOPCQ9HD26 462 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 COPRSQ9NQ92 184 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 A1CFQ9NQ94 594 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 BAZ2AQ9UIF9 1905 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 RAD50Q92878 1312 aa8.03□□□□□ -1.12
HERPUD1-217ENST00000569429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 CYSRT1A8MQ03 144 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 SPTLC1O15269 473 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 ZBED4O75132 1171 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 CSPG5O95196 566 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 POLR3DP05423 398 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 SLC4A3P48751 1232 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 RING1Q06587 406 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 PTK7Q13308 1070 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 RBM23Q86U06 439 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 ZDHHC14Q8IZN3 488 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 VN1R2Q8NFZ6 395 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 NETO1Q8TDF5 533 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 CDCA3Q99618 268 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 IFIH1Q9BYX4 1025 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 WDR11Q9BZH6 1224 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 TLE6Q9H808 572 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 SLC38A10Q9HBR0 1119 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 RAVER2Q9HCJ3 691 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 GPR108Q9NPR9 543 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 SWAP70Q9UH65 585 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 GTF2IRD1Q9UHL9 959 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 LHX6Q9UPM6 363 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 COG6Q9Y2V7 657 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 DDX49Q9Y6V7 483 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 IL16Q14005 1332 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 ADGRA3Q8IWK6 1321 aa8.02□□□□□ -1.13
HERPUD1-217ENST00000569429 GREB1LQ9C091 1923 aaPredicted RBP8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 SPAG17Q6Q759 2223 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 DENND4AQ7Z401 1863 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 NKRFO15226 690 aaKnown RBP eCLIP8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 ITGB1P05556 798 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 ASGR2P07307 311 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 UQCRFS1P1P0C7P4 283 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 EEF2P13639 858 aaKnown RBP8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 AKR1B1P15121 316 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms