RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 PPP1R18Q6NYC8 613 aa24.86■■□□□ 1.57
SPSB3-206ENST00000564709 KRT26Q7Z3Y9 468 aa24.86■■□□□ 1.57
SPSB3-206ENST00000564709 NDST4Q9H3R1 872 aa24.86■■□□□ 1.57
SPSB3-206ENST00000564709 RAB21Q9UL25 225 aa24.86■■□□□ 1.57
SPSB3-206ENST00000564709 GREB1LQ9C091 1923 aaPredicted RBP24.86■■□□□ 1.57
SPSB3-206ENST00000564709 SSBP05455 408 aaKnown RBP eCLIP24.86■■□□□ 1.57
SPSB3-206ENST00000564709 CAPZA3Q96KX2 299 aa24.86■■□□□ 1.57
SPSB3-206ENST00000564709 ABCB6Q9NP58 842 aa24.86■■□□□ 1.57
SPSB3-206ENST00000564709 KCNQ5Q9NR82 932 aa24.86■■□□□ 1.57
SPSB3-206ENST00000564709 SUGT1Q9Y2Z0 365 aa24.86■■□□□ 1.57
SPSB3-206ENST00000564709 MACROD2A1Z1Q3 448 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 EIF3CLB5ME19 914 aaKnown RBP24.85■■□□□ 1.57
SPSB3-206ENST00000564709 POTEB2H3BUK9 544 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 ZBTB5O15062 677 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 IPO7O95373 1038 aaKnown RBP24.85■■□□□ 1.57
SPSB3-206ENST00000564709 TCP10Q12799 353 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 BEND6Q5SZJ8 279 aaPredicted RBP24.85■■□□□ 1.57
SPSB3-206ENST00000564709 PPP4R3AQ6IN85 833 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 APOBEC3HQ6NTF7 200 aaKnown RBP24.85■■□□□ 1.57
SPSB3-206ENST00000564709 TMC4Q7Z404 712 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 GUF1Q8N442 669 aaKnown RBP24.85■■□□□ 1.57
SPSB3-206ENST00000564709 EIF3CQ99613 913 aaKnown RBP24.85■■□□□ 1.57
SPSB3-206ENST00000564709 PSTPIP2Q9H939 334 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 SIK3Q9Y2K2 1263 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L15C9J2P7 530 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L13C9JLJ4 530 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L11C9JVI0 530 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L18D6R9N7 530 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L22D6RA61 530 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L17D6RBQ6 530 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L19D6RCP7 530 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L20D6RJB6 530 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 G3V3G9 751 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 ZNF263O14978 683 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 KRT86O43790 486 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 HLA-DOAP06340 250 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L24Q0WX57 530 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 DCAF8Q5TAQ9 597 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 USP17L6PQ6QN14 398 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 TEKT1Q969V4 418 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 MMRN2Q9H8L6 949 aa24.85■■□□□ 1.57
SPSB3-206ENST00000564709 DNAJC18Q9H819 358 aa24.84■■□□□ 1.57
SPSB3-206ENST00000564709 A0A1W2PQJ5 194 aa24.84■■□□□ 1.57
SPSB3-206ENST00000564709 MRPL12P52815 198 aaKnown RBP24.84■■□□□ 1.57
SPSB3-206ENST00000564709 GPATCH4Q5T3I0 446 aaKnown RBP24.84■■□□□ 1.57
SPSB3-206ENST00000564709 C2CD5Q86YS7 1000 aa24.84■■□□□ 1.57
SPSB3-206ENST00000564709 CCDC170Q8IYT3 715 aa24.84■■□□□ 1.57
SPSB3-206ENST00000564709 MMS19Q96T76 1030 aa24.84■■□□□ 1.57
SPSB3-206ENST00000564709 DBNDD1Q9H9R9 158 aa24.84■■□□□ 1.57
SPSB3-206ENST00000564709 TBC1D7Q9P0N9 293 aa24.84■■□□□ 1.57
SPSB3-206ENST00000564709 GOLGB1Q14789 3259 aaKnown RBP24.84■■□□□ 1.57
SPSB3-206ENST00000564709 NRXN2Q9P2S2 1712 aa24.83■■□□□ 1.57
SPSB3-206ENST00000564709 H3BQF6 201 aa24.83■■□□□ 1.57
SPSB3-206ENST00000564709 MAN2A1Q16706 1144 aa24.83■■□□□ 1.57
SPSB3-206ENST00000564709 FIGNQ5HY92 759 aa24.83■■□□□ 1.57
SPSB3-206ENST00000564709 LRRC55Q6ZSA7 311 aa24.83■■□□□ 1.57
SPSB3-206ENST00000564709 CCDC155Q8N6L0 562 aa24.83■■□□□ 1.57
SPSB3-206ENST00000564709 SAR1BQ9Y6B6 198 aa24.83■■□□□ 1.57
SPSB3-206ENST00000564709 CACNB1Q02641 598 aaPredicted RBP24.83■■□□□ 1.56
SPSB3-206ENST00000564709 COASYQ13057 564 aa24.83■■□□□ 1.56
SPSB3-206ENST00000564709 SMCR8Q8TEV9 937 aaPredicted RBP24.83■■□□□ 1.56
SPSB3-206ENST00000564709 HNRNPLLQ8WVV9 542 aaKnown RBP24.83■■□□□ 1.56
SPSB3-206ENST00000564709 CCDC42Q96M95 316 aa24.83■■□□□ 1.56
SPSB3-206ENST00000564709 FGFBP2Q9BYJ0 223 aa24.83■■□□□ 1.56
SPSB3-206ENST00000564709 TRPC5Q9UL62 973 aaPredicted RBP24.83■■□□□ 1.56
SPSB3-206ENST00000564709 PCDHA12Q9UN75 941 aa24.83■■□□□ 1.56
SPSB3-206ENST00000564709 MYO3BQ8WXR4 1341 aa24.82■■□□□ 1.56
SPSB3-206ENST00000564709 MAP2K7O14733 419 aa24.82■■□□□ 1.56
SPSB3-206ENST00000564709 GYS2P54840 703 aa24.82■■□□□ 1.56
SPSB3-206ENST00000564709 EHHADHQ08426 723 aa24.82■■□□□ 1.56
SPSB3-206ENST00000564709 DNAJC19Q96DA6 116 aa24.82■■□□□ 1.56
SPSB3-206ENST00000564709 ARHGAP20Q9P2F6 1191 aa24.82■■□□□ 1.56
SPSB3-206ENST00000564709 SIPA1L1O43166 1804 aa24.82■■□□□ 1.56
SPSB3-206ENST00000564709 E9PMD0 336 aa24.81■■□□□ 1.56
SPSB3-206ENST00000564709 CRKP46108 304 aa24.81■■□□□ 1.56
SPSB3-206ENST00000564709 LRRC63Q05C16 580 aa24.81■■□□□ 1.56
SPSB3-206ENST00000564709 QRICH1Q2TAL8 776 aa24.81■■□□□ 1.56
SPSB3-206ENST00000564709 PROM2Q8N271 834 aa24.81■■□□□ 1.56
SPSB3-206ENST00000564709 COL11A2P13942 1736 aaPredicted RBP24.81■■□□□ 1.56
SPSB3-206ENST00000564709 ERLIN1O75477 346 aa24.81■■□□□ 1.56
SPSB3-206ENST00000564709 RAD51AP2Q09MP3 1159 aa24.81■■□□□ 1.56
SPSB3-206ENST00000564709 KIAA0825Q8IV33 1275 aa24.81■■□□□ 1.56
SPSB3-206ENST00000564709 TANGO6Q9C0B7 1094 aa24.81■■□□□ 1.56
SPSB3-206ENST00000564709 NPHP3-ACAD11A0A0J9YXS1 232 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 ZNF185O15231 689 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 VAV2P52735 878 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 SNAP25P60880 206 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 PAPD7Q5XG87 772 aaKnown RBP24.8■■□□□ 1.56
SPSB3-206ENST00000564709 ZNF662Q6ZS27 426 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 EHBP1Q8NDI1 1231 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 MTMR8Q96EF0 704 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 PANK4Q9NVE7 773 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 POTEB3A0JP26 581 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 LRRC53A6NM62 1247 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 POTECB2RU33 542 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 EEF2P13639 858 aaKnown RBP24.8■■□□□ 1.56
SPSB3-206ENST00000564709 POTEBQ6S5H4 581 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 HHIPL2Q6UWX4 724 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 C10orf71Q711Q0 1435 aa24.8■■□□□ 1.56
SPSB3-206ENST00000564709 RRAGAQ7L523 313 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms